RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 CORO7P57737 925 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 ISCUQ9H1K1 167 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 KIF1AQ12756 1690 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 DHX34Q14147 1143 aaKnown RBP18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 CHMP6Q96FZ7 201 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 CFAP57Q96MR6 1250 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 APEX2Q9UBZ4 518 aa18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 AFDNP55196 1824 aaKnown RBP18.4■□□□□ 0.54
SMARCA4-215ENST00000590574 CYP11B2P19099 503 aa18.39■□□□□ 0.54
SMARCA4-215ENST00000590574 DYNLT1P63172 113 aa18.39■□□□□ 0.54
SMARCA4-215ENST00000590574 MTERF2Q49AM1 385 aa18.39■□□□□ 0.54
SMARCA4-215ENST00000590574 CASC4Q6P4E1 433 aa18.39■□□□□ 0.54
SMARCA4-215ENST00000590574 ZBTB8OSQ8IWT0 167 aa18.39■□□□□ 0.54
SMARCA4-215ENST00000590574 ARL8AQ96BM9 186 aa18.39■□□□□ 0.54
SMARCA4-215ENST00000590574 ZNF341Q9BYN7 854 aa18.39■□□□□ 0.54
SMARCA4-215ENST00000590574 CELF4Q9BZC1 486 aaKnown RBP18.39■□□□□ 0.54
SMARCA4-215ENST00000590574 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.39■□□□□ 0.54
SMARCA4-215ENST00000590574 PITPNM2Q9BZ72 1349 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 TBX3O15119 743 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 ANXA13P27216 316 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 KRT81Q14533 505 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 SCYL2Q6P3W7 929 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 MICAL1Q8TDZ2 1067 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 CALR3Q96L12 384 aaKnown RBP18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 MLXIPLQ9NP71 852 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 FGFR4P22455 802 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 CCND2P30279 289 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 ARHGAP24Q8N264 748 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 SPATA20Q8TB22 786 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 CCDC110Q8TBZ0 833 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 HSD3B7Q9H2F3 369 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 QTRT2Q9H974 415 aaKnown RBP18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 PNMA2Q9UL42 364 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 RFX1P22670 979 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 SEC24CP53992 1094 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 METTL13Q8N6R0 699 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 SAAL1Q96ER3 474 aa18.39■□□□□ 0.53
SMARCA4-215ENST00000590574 ABL1P00519 1130 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 POLR2BP30876 1174 aaKnown RBP18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 MEA1Q16626 185 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 WNT8AQ9H1J5 351 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 GINS2Q9Y248 185 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 SLC26A4O43511 780 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 P4HBP07237 508 aaKnown RBP18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 CYTH3O43739 400 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 MED24O75448 989 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 NDUFB10O96000 172 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 RPA1P27694 616 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 ZNF233A6NK53 670 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 KIAA1755Q5JYT7 1200 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 DNAJC24Q6P3W2 148 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 HDAC7Q8WUI4 952 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 RILPQ96NA2 401 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 SPATA31A5Q5VU36 1347 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 SPATA31A7Q8IWB4 1347 aa18.38■□□□□ 0.53
SMARCA4-215ENST00000590574 TOPAZ1Q8N9V7 1692 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 GOLGA8SH3BPF8 625 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 EVX2Q03828 476 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 CCDC14Q49A88 953 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 MIS18BP1Q6P0N0 1132 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 RFX6Q8HWS3 928 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 SLC7A3Q8WY07 619 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 TRPC6Q9Y210 931 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 PPP2R5AQ15172 486 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 MUM1Q2TAK8 710 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 NYAP2Q9P242 653 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 CD58P19256 250 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 SESN3P58005 492 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 LRRC14Q15048 493 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 CCDC38Q502W7 563 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 PASD1Q8IV76 773 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 C1orf54Q8WWF1 131 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 HAUS1Q96CS2 278 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 MTMR8Q96EF0 704 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 PFASO15067 1338 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 HSPA1LP34931 641 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 YWHAGP61981 247 aaKnown RBP eCLIP18.37■□□□□ 0.534e-6■■□□□ 13.3
SMARCA4-215ENST00000590574 EPHA7Q15375 998 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 CEP55Q53EZ4 464 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 TPCN2Q8NHX9 752 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 ZNF507Q8TCN5 953 aa18.37■□□□□ 0.53
SMARCA4-215ENST00000590574 CYP26A1O43174 497 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 PON1P27169 355 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 PNMA5Q96PV4 448 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 NRBP2Q9NSY0 501 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 FEM1BQ9UK73 627 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 LRRD1A4D1F6 860 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 CHUKO15111 745 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 P4HA1P13674 534 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 HSD17B3P37058 310 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 QARSP47897 775 aaKnown RBP18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 BARGINQ6ZT62 677 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 CRAMP1Q96RY5 1269 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 NAGPAQ9UK23 515 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 PSAPP07602 524 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 PBX1P40424 430 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 JAK3P52333 1124 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 ACTN3Q08043 901 aaPredicted RBP18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 RASA3Q14644 834 aa18.36■□□□□ 0.53
SMARCA4-215ENST00000590574 THOC1Q96FV9 657 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms