RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 DUSP12Q9UNI6 340 aa19.61■□□□□ 0.73
RETREG3-210ENST00000590541 CACNA1AO00555 2505 aa19.6■□□□□ 0.73
RETREG3-210ENST00000590541 ZC3H11AO75152 810 aaKnown RBP eCLIP19.6■□□□□ 0.73
RETREG3-210ENST00000590541 NEFLP07196 543 aa19.6■□□□□ 0.73
RETREG3-210ENST00000590541 POLGP54098 1239 aaPredicted RBP19.6■□□□□ 0.73
RETREG3-210ENST00000590541 GIT2Q14161 759 aa19.6■□□□□ 0.73
RETREG3-210ENST00000590541 KRT32Q14532 448 aa19.6■□□□□ 0.73
RETREG3-210ENST00000590541 DDX53Q86TM3 631 aaKnown RBP19.6■□□□□ 0.73
RETREG3-210ENST00000590541 CABP7Q86V35 215 aa19.6■□□□□ 0.73
RETREG3-210ENST00000590541 SIX5Q8N196 739 aa19.6■□□□□ 0.73
RETREG3-210ENST00000590541 IGSF21Q96ID5 467 aa19.6■□□□□ 0.73
RETREG3-210ENST00000590541 ZNF577Q9BSK1 485 aa19.6■□□□□ 0.73
RETREG3-210ENST00000590541 KCNK12Q9HB15 430 aa19.6■□□□□ 0.73
RETREG3-210ENST00000590541 GABBR1Q9UBS5 961 aa19.6■□□□□ 0.73
RETREG3-210ENST00000590541 PCDHA10Q9Y5I2 948 aa19.6■□□□□ 0.73
RETREG3-210ENST00000590541 MYH9P35579 1960 aaKnown RBP19.59■□□□□ 0.73
RETREG3-210ENST00000590541 PSAPP07602 524 aa19.59■□□□□ 0.73
RETREG3-210ENST00000590541 CYP3A4P08684 503 aa19.59■□□□□ 0.73
RETREG3-210ENST00000590541 TMOD1P28289 359 aa19.59■□□□□ 0.73
RETREG3-210ENST00000590541 CCDC149Q6ZUS6 474 aa19.59■□□□□ 0.73
RETREG3-210ENST00000590541 OTOP3Q7RTS5 596 aa19.59■□□□□ 0.73
RETREG3-210ENST00000590541 SMAP1Q8IYB5 467 aaPredicted RBP19.59■□□□□ 0.73
RETREG3-210ENST00000590541 ZNF710Q8N1W2 664 aa19.59■□□□□ 0.73
RETREG3-210ENST00000590541 TMEM87AQ8NBN3 555 aa19.59■□□□□ 0.73
RETREG3-210ENST00000590541 RMDN1Q96DB5 314 aa19.59■□□□□ 0.73
RETREG3-210ENST00000590541 VN1R3Q9BXE9 311 aa19.59■□□□□ 0.73
RETREG3-210ENST00000590541 SFXN1Q9H9B4 322 aa19.59■□□□□ 0.73
RETREG3-210ENST00000590541 TBC1D22BQ9NU19 505 aa19.59■□□□□ 0.73
RETREG3-210ENST00000590541 BARHL2Q9NY43 387 aa19.59■□□□□ 0.73
RETREG3-210ENST00000590541 V9GY48 417 aaPredicted RBP19.59■□□□□ 0.73
RETREG3-210ENST00000590541 MED19A0JLT2 244 aaPredicted RBP19.58■□□□□ 0.72
RETREG3-210ENST00000590541 hCG_1984214I3L0E3 225 aa19.58■□□□□ 0.72
RETREG3-210ENST00000590541 CSDE1O75534 798 aaKnown RBP19.58■□□□□ 0.72
RETREG3-210ENST00000590541 GALTP07902 379 aa19.58■□□□□ 0.72
RETREG3-210ENST00000590541 JAKMIP3Q5VZ66 844 aa19.58■□□□□ 0.72
RETREG3-210ENST00000590541 SYNE3Q6ZMZ3 975 aa19.58■□□□□ 0.72
RETREG3-210ENST00000590541 ZNF713Q8N859 430 aaPredicted RBP19.58■□□□□ 0.72
RETREG3-210ENST00000590541 NRDE2Q9H7Z3 1164 aa19.58■□□□□ 0.72
RETREG3-210ENST00000590541 RBM28Q9NW13 759 aaKnown RBP19.58■□□□□ 0.72
RETREG3-210ENST00000590541 DACT1Q9NYF0 836 aa19.58■□□□□ 0.72
RETREG3-210ENST00000590541 FBXL21Q9UKT6 434 aa19.58■□□□□ 0.72
RETREG3-210ENST00000590541 ADAMTS3O15072 1205 aa19.57■□□□□ 0.72
RETREG3-210ENST00000590541 ZNF862O60290 1169 aa19.57■□□□□ 0.72
RETREG3-210ENST00000590541 HMGB1P09429 215 aaKnown RBP19.57■□□□□ 0.72
RETREG3-210ENST00000590541 PHKA2P46019 1235 aa19.57■□□□□ 0.72
RETREG3-210ENST00000590541 PTPN14Q15678 1187 aa19.57■□□□□ 0.72
RETREG3-210ENST00000590541 APOA5Q6Q788 366 aa19.57■□□□□ 0.72
RETREG3-210ENST00000590541 PPFIBP1Q86W92 1011 aa19.57■□□□□ 0.72
RETREG3-210ENST00000590541 LPPQ93052 612 aa19.57■□□□□ 0.72
RETREG3-210ENST00000590541 FAM167AQ96KS9 214 aa19.57■□□□□ 0.72
RETREG3-210ENST00000590541 GLT8D2Q9H1C3 349 aa19.57■□□□□ 0.72
RETREG3-210ENST00000590541 TBC1D13Q9NVG8 400 aa19.57■□□□□ 0.72
RETREG3-210ENST00000590541 DNAH14Q0VDD8 3507 aa19.57■□□□□ 0.72
RETREG3-210ENST00000590541 NARSO43776 548 aaKnown RBP19.56■□□□□ 0.72
RETREG3-210ENST00000590541 N4BP1O75113 896 aaKnown RBP19.56■□□□□ 0.72
RETREG3-210ENST00000590541 LMNAP02545 664 aaKnown RBP19.56■□□□□ 0.72
RETREG3-210ENST00000590541 OATP04181 439 aa19.56■□□□□ 0.72
RETREG3-210ENST00000590541 CLCN4P51793 760 aa19.56■□□□□ 0.72
RETREG3-210ENST00000590541 SETQ01105 290 aaPredicted RBP19.56■□□□□ 0.72
RETREG3-210ENST00000590541 SKAP1Q86WV1 359 aa19.56■□□□□ 0.72
RETREG3-210ENST00000590541 NLRP7Q8WX94 980 aa19.56■□□□□ 0.72
RETREG3-210ENST00000590541 RSPH1Q8WYR4 309 aa19.56■□□□□ 0.72
RETREG3-210ENST00000590541 SCLT1Q96NL6 688 aa19.56■□□□□ 0.72
RETREG3-210ENST00000590541 KLHL5Q96PQ7 755 aa19.56■□□□□ 0.72
RETREG3-210ENST00000590541 TRAIPQ9BWF2 469 aa19.56■□□□□ 0.72
RETREG3-210ENST00000590541 CHST12Q9NRB3 414 aa19.56■□□□□ 0.72
RETREG3-210ENST00000590541 C2orf16Q68DN1 1984 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 KRBA1A5PL33 1030 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 CARNS1A5YM72 827 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 MEIS3P2A8K0S8 358 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 B4GALT3O60512 393 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 DRP2Q13474 957 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 LETM2Q2VYF4 491 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 LONRF3Q496Y0 759 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 DHX32Q7L7V1 743 aaKnown RBP19.55■□□□□ 0.72
RETREG3-210ENST00000590541 KCNG4Q8TDN1 519 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 SEMA4AQ9H3S1 761 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 IGSF9Q9P2J2 1179 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 DNAJB4Q9UDY4 337 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 SAMM50Q9Y512 469 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 R4GN57 208 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 ZNF292O60281 2723 aa19.55■□□□□ 0.72
RETREG3-210ENST00000590541 DMXL1Q9Y485 3027 aa19.54■□□□□ 0.72
RETREG3-210ENST00000590541 SLC11A1P49279 550 aa19.54■□□□□ 0.72
RETREG3-210ENST00000590541 PRKCEQ02156 737 aa19.54■□□□□ 0.72
RETREG3-210ENST00000590541 RTN1Q16799 776 aa19.54■□□□□ 0.72
RETREG3-210ENST00000590541 NOMO2Q5JPE7 1267 aa19.54■□□□□ 0.72
RETREG3-210ENST00000590541 C15orf39Q6ZRI6 1047 aa19.54■□□□□ 0.72
RETREG3-210ENST00000590541 RSAD2Q8WXG1 361 aa19.54■□□□□ 0.72
RETREG3-210ENST00000590541 NRBP2Q9NSY0 501 aa19.54■□□□□ 0.72
RETREG3-210ENST00000590541 WNT16Q9UBV4 365 aa19.54■□□□□ 0.72
RETREG3-210ENST00000590541 TCEAL9Q9UHQ7 104 aa19.54■□□□□ 0.72
RETREG3-210ENST00000590541 BRPF3Q9ULD4 1205 aa19.54■□□□□ 0.72
RETREG3-210ENST00000590541 WDR81Q562E7 1941 aa19.54■□□□□ 0.72
RETREG3-210ENST00000590541 SPDYE4A6NLX3 237 aa19.53■□□□□ 0.72
RETREG3-210ENST00000590541 WDR64B1ANS9 1081 aa19.53■□□□□ 0.72
RETREG3-210ENST00000590541 LILRB3O75022 631 aa19.53■□□□□ 0.72
RETREG3-210ENST00000590541 OFD1O75665 1012 aa19.53■□□□□ 0.72
RETREG3-210ENST00000590541 CFHP08603 1231 aa19.53■□□□□ 0.72
RETREG3-210ENST00000590541 CNPP09543 421 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms