RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 IFT74Q96LB3 600 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 CELF4Q9BZC1 486 aaKnown RBP13.34□□□□□ -0.27
APOC1-206ENST00000590334 PARVGQ9HBI0 331 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 POLD4Q9HCU8 107 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 LARSQ9P2J5 1176 aaKnown RBP13.34□□□□□ -0.27
APOC1-206ENST00000590334 SEL1LQ9UBV2 794 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 TRPV2Q9Y5S1 764 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 CDY2AQ9Y6F7 541 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 SQORQ9Y6N5 450 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 SFI1A8K8P3 1242 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 M0QZ92 97 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 TBCAO75347 108 aaKnown RBP13.33□□□□□ -0.28
APOC1-206ENST00000590334 FAM13AO94988 1023 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 PARNO95453 639 aaKnown RBP13.33□□□□□ -0.28
APOC1-206ENST00000590334 TIMP1P01033 207 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 IQCF3P0C7M6 154 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 MAPTP10636 758 aaKnown RBP13.33□□□□□ -0.28
APOC1-206ENST00000590334 SELPP16109 830 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 GAP43P17677 238 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 SCP2P22307 547 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 NPTX2P47972 431 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 ASIC1P78348 528 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 CACNB1Q02641 598 aaPredicted RBP13.33□□□□□ -0.28
APOC1-206ENST00000590334 TMEM62Q0P6H9 643 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 TFDP1Q14186 410 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 KIZQ2M2Z5 673 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 CDCA2Q69YH5 1023 aaPredicted RBP13.33□□□□□ -0.28
APOC1-206ENST00000590334 LRRC8DQ7L1W4 858 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 CCDC65Q8IXS2 484 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 FIZ1Q96SL8 496 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 BLZF1Q9H2G9 400 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 CLSTN2Q9H4D0 955 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 CDHR5Q9HBB8 845 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 IFT122Q9HBG6 1241 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 OLFML3Q9NRN5 406 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 PANK4Q9NVE7 773 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 UMODL1Q5DID0 1318 aa13.33□□□□□ -0.28
APOC1-206ENST00000590334 A0A087WZ62 844 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 EVI5O60447 810 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 RPN1P04843 607 aaKnown RBP13.32□□□□□ -0.28
APOC1-206ENST00000590334 SRGAP2CP0DJJ0 459 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 IDEP14735 1019 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 SARSP49591 514 aaKnown RBP13.32□□□□□ -0.28
APOC1-206ENST00000590334 NCKAP1LP55160 1127 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 PEX3P56589 373 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 PTENP60484 403 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 COASYQ13057 564 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 DMP1Q13316 513 aaPredicted RBP13.32□□□□□ -0.28
APOC1-206ENST00000590334 PNOCQ13519 176 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 KCNB1Q14721 858 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 ODR4Q5SWX8 454 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 NT5DC1Q5TFE4 455 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 C7orf61Q8IZ16 206 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 MYCT1Q8N699 235 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 USP38Q8NB14 1042 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 RNF149Q8NC42 400 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 NLRP4Q96MN2 994 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 FDXACB1Q9BRP7 624 aaPredicted RBP13.32□□□□□ -0.28
APOC1-206ENST00000590334 WNT8AQ9H1J5 351 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 ST6GALNAC4Q9H4F1 302 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 ARHGAP28Q9P2N2 729 aa13.32□□□□□ -0.28
APOC1-206ENST00000590334 MICAL3Q7RTP6 2002 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 H0YCG3 227 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 TRAK2O60296 914 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 RHOBTB3O94955 611 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 CTSHP09668 335 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 DARSP14868 501 aaKnown RBP13.31□□□□□ -0.28
APOC1-206ENST00000590334 EIF4BP23588 611 aaKnown RBP13.31□□□□□ -0.28
APOC1-206ENST00000590334 ITGB8P26012 769 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 CYP2C18P33260 490 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 ABCD1P33897 745 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 RFC2P35250 354 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 PHKA2P46019 1235 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 EFNA5P52803 228 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 SMTNP53814 917 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 PSMD2Q13200 908 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 MBTPS1Q14703 1052 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 GPNMBQ14956 572 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 PCBP1Q15365 356 aaKnown RBP eCLIP13.31□□□□□ -0.285e-16■■■■■ 49.4
APOC1-206ENST00000590334 NFKBIBQ15653 356 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 KLHL40Q2TBA0 621 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 FBXO47Q5MNV8 452 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 MFSD5Q6N075 450 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 FAM43BQ6ZT52 329 aaPredicted RBP13.31□□□□□ -0.28
APOC1-206ENST00000590334 SRGAP1Q7Z6B7 1085 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 SFR1Q86XK3 245 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 FAM178BQ8IXR5 827 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 SLC17A8Q8NDX2 589 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 TMEM161BQ8NDZ6 487 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 NLRP7Q8WX94 980 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 GSDMAQ96QA5 445 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 OSMRQ99650 979 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 STRA6Q9BX79 667 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 GCOM2Q9BZD3 368 aaPredicted RBP13.31□□□□□ -0.28
APOC1-206ENST00000590334 PPP1R12CQ9BZL4 782 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 INO80BQ9C086 356 aaPredicted RBP13.31□□□□□ -0.28
APOC1-206ENST00000590334 NUP62CLQ9H1M0 184 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 C2orf40Q9H1Z8 148 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 KMT5AQ9NQR1 393 aa13.31□□□□□ -0.28
APOC1-206ENST00000590334 PRDM5Q9NQX1 630 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms