RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 RPS6KA4O75676 772 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 NPTXRO95502 500 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 AMY2AP04746 511 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 MMEP08473 750 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 AMY2BP19961 511 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 SOX5P35711 763 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 STAT3P40763 770 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 SPTY2D1Q68D10 685 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-207ENST00000589076 CNNM4Q6P4Q7 775 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 LRSAM1Q6UWE0 723 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 UBE2R2Q712K3 238 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-207ENST00000589076 THNSL2Q86YJ6 484 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 PPM1KQ8N3J5 372 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 SLC25A43Q8WUT9 341 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-207ENST00000589076 VOPP1Q96AW1 172 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 SLC7A6OSQ96CW6 309 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-207ENST00000589076 GPATCH3Q96I76 525 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 GBP4Q96PP9 640 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 AMNQ9BXJ7 453 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 SLC6A15Q9H2J7 730 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 PCDH12Q9NPG4 1184 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 KCNH7Q9NS40 1196 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 CBLCQ9ULV8 474 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 ASB1Q9Y576 335 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 TNPO3Q9Y5L0 923 aaKnown RBP4.86□□□□□ -1.63
SMAD4-207ENST00000589076 COL4A3BPQ9Y5P4 624 aa4.86□□□□□ -1.63
SMAD4-207ENST00000589076 hCG_2014768A0A024R1R8 64 aa4.85□□□□□ -1.63
SMAD4-207ENST00000589076 PRAMEF22A3QJZ6 481 aa4.85□□□□□ -1.63
SMAD4-207ENST00000589076 GSG1L2A8MUP6 293 aa4.85□□□□□ -1.63
SMAD4-207ENST00000589076 ZNF561-AS1K7EIQ3 104 aa4.85□□□□□ -1.63
SMAD4-207ENST00000589076 ARVCFO00192 962 aa4.85□□□□□ -1.63
SMAD4-207ENST00000589076 SCDO00767 359 aa4.85□□□□□ -1.63
SMAD4-207ENST00000589076 FOXP2O15409 715 aa4.85□□□□□ -1.63
SMAD4-207ENST00000589076 HIP1RO75146 1068 aa4.85□□□□□ -1.63
SMAD4-207ENST00000589076 GCP02774 474 aa4.85□□□□□ -1.63
SMAD4-207ENST00000589076 HSP90B1P14625 803 aaKnown RBP4.85□□□□□ -1.63
SMAD4-207ENST00000589076 ANAPC15P60006 121 aa4.85□□□□□ -1.63
SMAD4-207ENST00000589076 ADAM15Q13444 863 aa4.85□□□□□ -1.63
SMAD4-207ENST00000589076 TARS2Q9BW92 718 aaKnown RBP4.85□□□□□ -1.63
SMAD4-207ENST00000589076 GPR87Q9BY21 358 aa4.85□□□□□ -1.63
SMAD4-207ENST00000589076 AGO3Q9H9G7 860 aaKnown RBP4.85□□□□□ -1.63
SMAD4-207ENST00000589076 SAE1Q9UBE0 346 aaPredicted RBP4.85□□□□□ -1.63
SMAD4-207ENST00000589076 TNFRSF18Q9Y5U5 241 aa4.85□□□□□ -1.63
SMAD4-207ENST00000589076 GOLGA6L6A8MZA4 724 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 MFAP3LO75121 409 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 RASGRP1O95267 797 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 MPIG6BO95866 241 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 NUDT3O95989 172 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 JMJD7P0C870 316 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 KCNA6P17658 529 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 CNGA1P29973 690 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 NEK4P51957 841 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 MRPS21P82921 87 aaKnown RBP4.84□□□□□ -1.63
SMAD4-207ENST00000589076 LACTBP83111 547 aaPredicted RBP4.84□□□□□ -1.63
SMAD4-207ENST00000589076 ATP2C1P98194 919 aaPredicted RBP4.84□□□□□ -1.63
SMAD4-207ENST00000589076 PTPAQ15257 358 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 ELAVL1Q15717 326 aaKnown RBP4.84□□□□□ -1.63
SMAD4-207ENST00000589076 CFAP100Q494V2 611 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 CT47A1Q5JQC4 288 aaPredicted RBP4.84□□□□□ -1.63
SMAD4-207ENST00000589076 PCSK4Q6UW60 755 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 DDX46Q7L014 1031 aaKnown RBP4.84□□□□□ -1.63
SMAD4-207ENST00000589076 RNF180Q86T96 592 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 DDX53Q86TM3 631 aaKnown RBP4.84□□□□□ -1.63
SMAD4-207ENST00000589076 ASB15Q8WXK1 588 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 E2F7Q96AV8 911 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 RCAN3Q9UKA8 241 aa4.84□□□□□ -1.63
SMAD4-207ENST00000589076 CTDP1Q9Y5B0 961 aaPredicted RBP4.84□□□□□ -1.63
SMAD4-207ENST00000589076 KCNK3O14649 394 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 MAFO75444 373 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-207ENST00000589076 IPO13O94829 963 aaKnown RBP4.83□□□□□ -1.64
SMAD4-207ENST00000589076 CPEP16870 476 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 SCNN1GP51170 649 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 ATXN1P54253 815 aaKnown RBP4.83□□□□□ -1.64
SMAD4-207ENST00000589076 AMPD3Q01432 767 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 CCDC142Q17RM4 750 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 LY6G5CQ5SRR4 150 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 CDCA2Q69YH5 1023 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-207ENST00000589076 KRT40Q6A162 431 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 MFSD5Q6N075 450 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 ZCCHC8Q6NZY4 707 aaKnown RBP4.83□□□□□ -1.64
SMAD4-207ENST00000589076 FAM111BQ6SJ93 734 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 GAREM2Q75VX8 874 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 KIF18BQ86Y91 864 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 RPUSD2Q8IZ73 545 aaKnown RBP4.83□□□□□ -1.64
SMAD4-207ENST00000589076 TCF25Q9BQ70 676 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 ORAI3Q9BRQ5 295 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 MTFR1LQ9H019 292 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 RIOX1Q9H6W3 641 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 SMURF1Q9HCE7 757 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 PTGFRNQ9P2B2 879 aa4.83□□□□□ -1.64
SMAD4-207ENST00000589076 FAM83GA6ND36 823 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 KRT4P19013 534 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 ADCY7P51828 1080 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 BPIFB4P59827 614 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 ZNF460Q14592 562 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 TMEM132BQ14DG7 1078 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 PCBP1Q15365 356 aaKnown RBP eCLIP4.82□□□□□ -1.64
SMAD4-207ENST00000589076 CSRP2Q16527 193 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 RABL3Q5HYI8 236 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 Q6ZRM9 215 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms