RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 C4orf32Q8N8J7 132 aa23.41■■□□□ 1.34
NCLN-204ENST00000588428 MTRQ99707 1265 aa23.41■■□□□ 1.34
NCLN-204ENST00000588428 POLR3CQ9BUI4 534 aaPredicted RBP23.41■■□□□ 1.34
NCLN-204ENST00000588428 XPNPEP1Q9NQW7 623 aa23.41■■□□□ 1.34
NCLN-204ENST00000588428 TTC28Q96AY4 2481 aa23.41■■□□□ 1.34
NCLN-204ENST00000588428 NCOR1O75376 2440 aa23.41■■□□□ 1.34
NCLN-204ENST00000588428 EOMESO95936 686 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 MUTP22033 750 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 RARRES1P49788 294 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 GATMP50440 423 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 TOB1P50616 345 aaPredicted RBP23.4■■□□□ 1.34
NCLN-204ENST00000588428 FXR2P51116 673 aaKnown RBP eCLIP23.4■■□□□ 1.34
NCLN-204ENST00000588428 SKIV2LQ15477 1246 aaKnown RBP23.4■■□□□ 1.34
NCLN-204ENST00000588428 AAK1Q2M2I8 961 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 PAN2Q504Q3 1202 aaKnown RBP23.4■■□□□ 1.34
NCLN-204ENST00000588428 SRGAP1Q7Z6B7 1085 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 ZNF598Q86UK7 904 aaKnown RBP23.4■■□□□ 1.34
NCLN-204ENST00000588428 FERMT3Q86UX7 667 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 KSR1Q8IVT5 923 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 ERMNQ8TAM6 284 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 PRPF31Q8WWY3 499 aaKnown RBP23.4■■□□□ 1.34
NCLN-204ENST00000588428 RSPH1Q8WYR4 309 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 TMEM143Q96AN5 459 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 NLRP4Q96MN2 994 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 BACH2Q9BYV9 841 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 TMEM117Q9H0C3 514 aa23.4■■□□□ 1.34
NCLN-204ENST00000588428 FGFR4P22455 802 aa23.39■■□□□ 1.33
NCLN-204ENST00000588428 RPA1P27694 616 aa23.39■■□□□ 1.33
NCLN-204ENST00000588428 GJB2P29033 226 aa23.39■■□□□ 1.33
NCLN-204ENST00000588428 TECP42680 631 aa23.39■■□□□ 1.33
NCLN-204ENST00000588428 POU5F1BQ06416 359 aa23.39■■□□□ 1.33
NCLN-204ENST00000588428 LAMTOR4Q0VGL1 99 aa23.39■■□□□ 1.33
NCLN-204ENST00000588428 MXD4Q14582 209 aaPredicted RBP23.39■■□□□ 1.33
NCLN-204ENST00000588428 FAM102BQ5T8I3 360 aa23.39■■□□□ 1.33
NCLN-204ENST00000588428 CATSPER3Q86XQ3 398 aa23.39■■□□□ 1.33
NCLN-204ENST00000588428 RNF19AQ9NV58 838 aa23.39■■□□□ 1.33
NCLN-204ENST00000588428 DBR1Q9UK59 544 aaKnown RBP23.39■■□□□ 1.33
NCLN-204ENST00000588428 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.39■■□□□ 1.33
NCLN-204ENST00000588428 TBKBP1A7MCY6 615 aa23.38■■□□□ 1.33
NCLN-204ENST00000588428 LAD1O00515 517 aa23.38■■□□□ 1.33
NCLN-204ENST00000588428 CSDE1O75534 798 aaKnown RBP23.38■■□□□ 1.33
NCLN-204ENST00000588428 PCBP1Q15365 356 aaKnown RBP eCLIP23.38■■□□□ 1.33
NCLN-204ENST00000588428 IFNLR1Q8IU57 520 aaPredicted RBP23.38■■□□□ 1.33
NCLN-204ENST00000588428 HLA-CQ95604 372 aa23.38■■□□□ 1.33
NCLN-204ENST00000588428 NSUN3Q9H649 340 aaKnown RBP23.38■■□□□ 1.33
NCLN-204ENST00000588428 PLAGL2Q9UPG8 496 aa23.38■■□□□ 1.33
NCLN-204ENST00000588428 GRM6O15303 877 aa23.37■■□□□ 1.33
NCLN-204ENST00000588428 MED24O75448 989 aa23.37■■□□□ 1.33
NCLN-204ENST00000588428 FGFR1P11362 822 aa23.37■■□□□ 1.33
NCLN-204ENST00000588428 SKIP12755 728 aa23.37■■□□□ 1.33
NCLN-204ENST00000588428 ATF7P17544 494 aaPredicted RBP23.37■■□□□ 1.33
NCLN-204ENST00000588428 COL19A1Q14993 1142 aa23.37■■□□□ 1.33
NCLN-204ENST00000588428 HAUS3Q68CZ6 603 aa23.37■■□□□ 1.33
NCLN-204ENST00000588428 CATSPER4Q7RTX7 472 aa23.37■■□□□ 1.33
NCLN-204ENST00000588428 CCDC43Q96MW1 224 aaKnown RBP23.37■■□□□ 1.33
NCLN-204ENST00000588428 NACC1Q96RE7 527 aa23.37■■□□□ 1.33
NCLN-204ENST00000588428 AAASQ9NRG9 546 aa23.37■■□□□ 1.33
NCLN-204ENST00000588428 AGPAT5Q9NUQ2 364 aa23.37■■□□□ 1.33
NCLN-204ENST00000588428 STK24Q9Y6E0 443 aa23.37■■□□□ 1.33
NCLN-204ENST00000588428 TCF20Q9UGU0 1960 aaKnown RBP23.37■■□□□ 1.33
NCLN-204ENST00000588428 VCANP13611 3396 aa23.37■■□□□ 1.33
NCLN-204ENST00000588428 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.36■■□□□ 1.33
NCLN-204ENST00000588428 ARL2P36404 184 aa23.36■■□□□ 1.33
NCLN-204ENST00000588428 PRPHP41219 470 aa23.36■■□□□ 1.33
NCLN-204ENST00000588428 PHKA2P46019 1235 aa23.36■■□□□ 1.33
NCLN-204ENST00000588428 RAB27AP51159 221 aa23.36■■□□□ 1.33
NCLN-204ENST00000588428 CUL4AQ13619 759 aa23.36■■□□□ 1.33
NCLN-204ENST00000588428 PDIA5Q14554 519 aa23.36■■□□□ 1.33
NCLN-204ENST00000588428 NBR1Q14596 966 aa23.36■■□□□ 1.33
NCLN-204ENST00000588428 CSPP1Q1MSJ5 1256 aa23.36■■□□□ 1.33
NCLN-204ENST00000588428 RILPL1Q5EBL4 403 aa23.36■■□□□ 1.33
NCLN-204ENST00000588428 PIGOQ8TEQ8 1089 aa23.36■■□□□ 1.33
NCLN-204ENST00000588428 CASD1Q96PB1 797 aa23.36■■□□□ 1.33
NCLN-204ENST00000588428 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.36■■□□□ 1.33
NCLN-204ENST00000588428 BMP2KQ9NSY1 1161 aaPredicted RBP23.36■■□□□ 1.33
NCLN-204ENST00000588428 SMC3Q9UQE7 1217 aa23.36■■□□□ 1.33
NCLN-204ENST00000588428 PIN4Q9Y237 131 aaKnown RBP23.36■■□□□ 1.33
NCLN-204ENST00000588428 PCDHB6Q9Y5E3 794 aa23.36■■□□□ 1.33
NCLN-204ENST00000588428 SPTBN5Q9NRC6 3674 aaKnown RBP23.35■■□□□ 1.33
NCLN-204ENST00000588428 ZNF623O75123 536 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 ITGB1P05556 798 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 IBSPP21815 317 aaPredicted RBP23.35■■□□□ 1.33
NCLN-204ENST00000588428 PTENP60484 403 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 PTGDRQ13258 359 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 LRRC43Q8N309 656 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 IGSF22Q8N9C0 903 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 KLHL23Q8NBE8 558 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 RNF149Q8NC42 400 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 SPPL3Q8TCT6 385 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 NFKBIZQ9BYH8 718 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 RAB34Q9BZG1 259 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 CWH43Q9H720 699 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 MINDY3Q9H8M7 445 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 PCDHB12Q9Y5F1 795 aa23.35■■□□□ 1.33
NCLN-204ENST00000588428 SRGAP2CP0DJJ0 459 aa23.34■■□□□ 1.33
NCLN-204ENST00000588428 LAG3P18627 525 aa23.34■■□□□ 1.33
NCLN-204ENST00000588428 TFF2Q03403 129 aa23.34■■□□□ 1.33
NCLN-204ENST00000588428 UBE3AQ05086 875 aa23.34■■□□□ 1.33
NCLN-204ENST00000588428 CAMK1Q14012 370 aa23.34■■□□□ 1.33
NCLN-204ENST00000588428 TFDP1Q14186 410 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms