RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 ABI1Q8IZP0 508 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 ZNF710Q8N1W2 664 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 C12orf76Q8N812 135 aaPredicted RBP15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 SLC22A17Q8WUG5 538 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 AUTS2Q8WXX7 1259 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 SLC5A5Q92911 643 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 NECTIN4Q96NY8 510 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 AGXT2Q9BYV1 514 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 UNC45AQ9H3U1 944 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 TSHZ2Q9NRE2 1034 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 DISC1Q9NRI5 854 aa15.59■□□□□ 0.09
CLPTM1-208ENST00000588274 PRPF3O43395 683 aaKnown RBP15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 ASGR2P07307 311 aa15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 EPCAMP16422 314 aa15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 ZSCAN20P17040 1043 aaPredicted RBP15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 PHKA2P46019 1235 aa15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 CWF19L1Q69YN2 538 aaKnown RBP15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 MCTP2Q6DN12 878 aa15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 RNF169Q8NCN4 708 aa15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 PHKBQ93100 1093 aa15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 RIT2Q99578 217 aa15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 MRPL9Q9BYD2 267 aaKnown RBP15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 C6orf50Q9HD87 102 aa15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 NR2E1Q9Y466 385 aa15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 GVINP1Q7Z2Y8 2422 aa15.58■□□□□ 0.08
CLPTM1-208ENST00000588274 DMXL1Q9Y485 3027 aa15.57■□□□□ 0.08
CLPTM1-208ENST00000588274 PSMD10O75832 226 aa15.57■□□□□ 0.08
CLPTM1-208ENST00000588274 TMOD1P28289 359 aa15.57■□□□□ 0.08
CLPTM1-208ENST00000588274 NBL1P41271 181 aa15.57■□□□□ 0.08
CLPTM1-208ENST00000588274 ZDHHC14Q8IZN3 488 aa15.57■□□□□ 0.08
CLPTM1-208ENST00000588274 FBXL16Q8N461 479 aa15.57■□□□□ 0.08
CLPTM1-208ENST00000588274 BRF1Q92994 677 aa15.57■□□□□ 0.08
CLPTM1-208ENST00000588274 LPPQ93052 612 aa15.57■□□□□ 0.08
CLPTM1-208ENST00000588274 IGSF21Q96ID5 467 aa15.57■□□□□ 0.08
CLPTM1-208ENST00000588274 NIFKQ9BYG3 293 aaKnown RBP15.57■□□□□ 0.08
CLPTM1-208ENST00000588274 NRDE2Q9H7Z3 1164 aa15.57■□□□□ 0.08
CLPTM1-208ENST00000588274 TBC1D13Q9NVG8 400 aa15.57■□□□□ 0.08
CLPTM1-208ENST00000588274 C2orf16Q68DN1 1984 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 MYO10Q9HD67 2058 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 WDR87Q6ZQQ6 2873 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 M0R2N6 131 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 CTSAP10619 480 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 MTHFRP42898 656 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 KRT32Q14532 448 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 PTPN14Q15678 1187 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 NPY5RQ15761 445 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 RARS2Q5T160 578 aaKnown RBP15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 ZBTB33Q86T24 672 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 VPS52Q8N1B4 723 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 ATOH1Q92858 354 aaPredicted RBP15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 SH2D3AQ9BRG2 576 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 DNAJB4Q9UDY4 337 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 SAMM50Q9Y512 469 aa15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 RIF1Q5UIP0 2472 aaKnown RBP15.56■□□□□ 0.08
CLPTM1-208ENST00000588274 A0A087WZ62 844 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 PRR23AA6NEV1 266 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 CHMP2AO43633 222 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 ZC3H11AO75152 810 aaKnown RBP eCLIP15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 GALTP07902 379 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 GNA11P29992 359 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 SFNP31947 248 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 SLC11A1P49279 550 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 AFF1P51825 1210 aaKnown RBP15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 JAK3P52333 1124 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 POLGP54098 1239 aaPredicted RBP15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 EVCP57679 992 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 TBC1D8BQ0IIM8 1120 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 CES5AQ6NT32 575 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 Q6ZUG5 572 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 DDX53Q86TM3 631 aaKnown RBP15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 TDRD5Q8NAT2 981 aaKnown RBP15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 ETNPPLQ8TBG4 499 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 CCDC12Q8WUD4 166 aaPredicted RBP15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 NLRP7Q8WX94 980 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 RSPH1Q8WYR4 309 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 TMEM169Q96HH4 297 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 CCDC136Q96JN2 1154 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 MBOAT7Q96N66 472 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 FDXACB1Q9BRP7 624 aaPredicted RBP15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 RNF26Q9BY78 433 aaPredicted RBP15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 CHST12Q9NRB3 414 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 DZANK1Q9NVP4 752 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 DACT1Q9NYF0 836 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 VPS54Q9P1Q0 977 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 USTQ9Y2C2 406 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 DNAH14Q0VDD8 3507 aa15.55■□□□□ 0.08
CLPTM1-208ENST00000588274 FRYLO94915 3013 aa15.54■□□□□ 0.08
CLPTM1-208ENST00000588274 CACNA1AO00555 2505 aa15.54■□□□□ 0.08
CLPTM1-208ENST00000588274 FAM186AA6NE01 2351 aa15.54■□□□□ 0.08
CLPTM1-208ENST00000588274 CCDC196A0A1B0GTZ2 297 aa15.54■□□□□ 0.08
CLPTM1-208ENST00000588274 GAS7O60861 476 aa15.54■□□□□ 0.08
CLPTM1-208ENST00000588274 LILRB3O75022 631 aa15.54■□□□□ 0.08
CLPTM1-208ENST00000588274 OFD1O75665 1012 aa15.54■□□□□ 0.08
CLPTM1-208ENST00000588274 TDP2O95551 362 aa15.54■□□□□ 0.08
CLPTM1-208ENST00000588274 CXCL14O95715 111 aa15.54■□□□□ 0.08
CLPTM1-208ENST00000588274 EFEMP2O95967 443 aa15.54■□□□□ 0.08
CLPTM1-208ENST00000588274 HMGB1P09429 215 aaKnown RBP15.54■□□□□ 0.08
CLPTM1-208ENST00000588274 NPR3P17342 541 aa15.54■□□□□ 0.08
CLPTM1-208ENST00000588274 ALDH7A1P49419 539 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms