RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 TCEAL9Q9UHQ7 104 aa10.5□□□□□ -0.73
LINC01539-201ENST00000587904 CORO1CQ9ULV4 474 aaPredicted RBP10.5□□□□□ -0.73
LINC01539-201ENST00000587904 PTPRFP10586 1907 aa10.5□□□□□ -0.73
LINC01539-201ENST00000587904 NPHP3-ACAD11A0A0J9YXS1 232 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 A0A1W2PQJ5 194 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 EIF3DO15371 548 aaKnown RBP eCLIP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 EIF3HO15372 352 aaKnown RBP eCLIP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 STAM2O75886 525 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 LYPLA2O95372 231 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 P4HBP07237 508 aaKnown RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 IREB2P48200 963 aaKnown RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 CHMP4BP1P59074 171 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 MRPS9P82933 396 aaKnown RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 ROR2Q01974 943 aaKnown RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 CTTNQ14247 550 aaKnown RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 VWA3BQ502W6 1294 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 MIIPQ5JXC2 388 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 ARHGEF16Q5VV41 709 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 RINT1Q6NUQ1 792 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 CYP26C1Q6V0L0 522 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 NSMFQ6X4W1 530 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 STXBP4Q6ZWJ1 553 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 USP50Q70EL3 339 aaPredicted RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 MIER3Q7Z3K6 550 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 MYLK4Q86YV6 388 aaPredicted RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 PARP9Q8IXQ6 854 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 CCDC170Q8IYT3 715 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 MIPOL1Q8TD10 442 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 ZC3H15Q8WU90 426 aaKnown RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 GPRASP2Q96D09 838 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 TAAR1Q96RJ0 339 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 DNAJC7Q99615 494 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 LXNQ9BS40 222 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 KCTD10Q9H3F6 313 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 ZSWIM4Q9H7M6 989 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 CAPN11Q9UMQ6 739 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 PPP2R2CQ9Y2T4 447 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 DHX15O43143 795 aaKnown RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 OPA1O60313 960 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 CCDC175P0C221 793 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 FERP16591 822 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 EIF2AK2P19525 551 aaKnown RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 SFNP31947 248 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 KRT9P35527 623 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 JAK3P52333 1124 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 ZNF131P52739 623 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 KRT76Q01546 638 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 LRRC41Q15345 812 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 TSR1Q2NL82 804 aaKnown RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 C1orf186Q6ZWK4 172 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 NLRX1Q86UT6 975 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 TAX1BP1Q86VP1 789 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 SFR1Q86XK3 245 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 GLIS3Q8NEA6 775 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 FAM76AQ8TAV0 307 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 BCAS4Q8TDM0 211 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 NSUN6Q8TEA1 469 aaKnown RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 CPLX3Q8WVH0 158 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 DTNBP1Q96EV8 351 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 CDHR1Q96JP9 859 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 ALS2CR12Q96Q35 445 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 RUSC1Q9BVN2 902 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 TTYH3Q9C0H2 523 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 NDST4Q9H3R1 872 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 ACTR5Q9H9F9 607 aaPredicted RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 DBR1Q9UK59 544 aaKnown RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 TRAF3IP3Q9Y228 551 aa10.49□□□□□ -0.73
LINC01539-201ENST00000587904 LUC7L2Q9Y383 392 aaKnown RBP10.49□□□□□ -0.73
LINC01539-201ENST00000587904 GOLGA6L7A0A1B0GV03 622 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 SPDYE16A6NNV3 312 aaPredicted RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 TRAF5O00463 557 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 PDXKO00764 312 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 FANCGO15287 622 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 CALUO43852 315 aaPredicted RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 FAM13AO94988 1023 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 SYF2O95926 243 aaKnown RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 TRIM21P19474 475 aaKnown RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 TPP2P29144 1249 aaPredicted RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 PEX19P40855 299 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 BAATQ14032 418 aaPredicted RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 TMEM132BQ14DG7 1078 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 KNOP1Q1ED39 458 aaKnown RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 C9orf131Q5VYM1 1079 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 MIS18BP1Q6P0N0 1132 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 ARHGAP22Q7Z5H3 698 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 APLFQ8IW19 511 aaPredicted RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 PROCA1Q8NCQ7 364 aaPredicted RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 CHST13Q8NET6 341 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 WNK4Q96J92 1243 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 TIPINQ9BVW5 301 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 ZHX3Q9H4I2 956 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 RMI1Q9H9A7 625 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 PARVGQ9HBI0 331 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 SUN2Q9UH99 717 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 FAM184BQ9ULE4 1060 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 WDR64B1ANS9 1081 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 CETN3O15182 167 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 OATP04181 439 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms