RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 JPH2Q9BR39 696 aaPredicted RBP8.96□□□□□ -0.98
SMAD4-204ENST00000586253 PPP1R12CQ9BZL4 782 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 WNT8AQ9H1J5 351 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 ANKEF1Q9NU02 776 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 WRAP73Q9P2S5 460 aaPredicted RBP8.96□□□□□ -0.98
SMAD4-204ENST00000586253 LRWD1Q9UFC0 647 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 ATP6V1DQ9Y5K8 247 aa8.96□□□□□ -0.98
SMAD4-204ENST00000586253 LOXHD1Q8IVV2 1947 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 VWA3AA6NCI4 1184 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 GAS2O43903 313 aaKnown RBP8.95□□□□□ -0.98
SMAD4-204ENST00000586253 MED24O75448 989 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 C22orf31O95567 290 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 YEATS4O95619 227 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 PFKMP08237 780 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 JUNDP17535 347 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 KLRC1P26715 233 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 TMOD1P28289 359 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 CYP2C18P33260 490 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 DDIT3P35638 169 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 LONP1P36776 959 aaKnown RBP8.95□□□□□ -0.98
SMAD4-204ENST00000586253 THPOP40225 353 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 NUCB2P80303 420 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 TBC1D8BQ0IIM8 1120 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 CTTNQ14247 550 aaKnown RBP8.95□□□□□ -0.98
SMAD4-204ENST00000586253 SLC39A14Q15043 492 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 FAM26DQ5JW98 314 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 KRT79Q5XKE5 535 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 FAM173BQ6P4H8 233 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 RUFY4Q6ZNE9 571 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 LRRC8DQ7L1W4 858 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 LINC01465Q8N7H1 131 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 TRAPPC12Q8WVT3 735 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 WNT8BQ93098 351 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 NACC1Q96RE7 527 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 USP28Q96RU2 1077 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 CEP89Q96ST8 783 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 CYP26B1Q9NR63 512 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 CFAP45Q9UL16 551 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 PCDHGC3Q9UN70 934 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 SRPRBQ9Y5M8 271 aaKnown RBP8.95□□□□□ -0.98
SMAD4-204ENST00000586253 CLIC4Q9Y696 253 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 ARID2Q68CP9 1835 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 UMODL1Q5DID0 1318 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 KDM3AQ9Y4C1 1321 aa8.95□□□□□ -0.98
SMAD4-204ENST00000586253 EVPLQ92817 2033 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 IGKV6-21A0A0C4DH24 114 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 A0A1W2PPC1 479 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 RSPH10B2B2RC85 870 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 PPP6R2O75170 966 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 MAFO75444 373 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-204ENST00000586253 CXCL10P02778 98 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 RSPH10BP0C881 870 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 CSF2RAP15509 400 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 CCT6AP40227 531 aaKnown RBP8.94□□□□□ -0.98
SMAD4-204ENST00000586253 CCL23P55773 120 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 CDC42EP1Q00587 391 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 MTERF2Q49AM1 385 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 HYIQ5T013 277 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 ZNF618Q5T7W0 954 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 IER5Q5VY09 327 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 PSRC1Q6PGN9 363 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-204ENST00000586253 FAM43BQ6ZT52 329 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-204ENST00000586253 TRMT1LQ7Z2T5 733 aaKnown RBP8.94□□□□□ -0.98
SMAD4-204ENST00000586253 RPUSD2Q8IZ73 545 aaKnown RBP8.94□□□□□ -0.98
SMAD4-204ENST00000586253 KIAA0319LQ8IZA0 1049 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 LINC00301Q8NCQ3 95 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 KCNG4Q8TDN1 519 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 SNX29Q8TEQ0 813 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 DNAJB3Q8WWF6 145 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 SLC7A3Q8WY07 619 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 CEP170P1Q96L14 293 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 MMTAG2Q9BU76 263 aaKnown RBP8.94□□□□□ -0.98
SMAD4-204ENST00000586253 FTOQ9C0B1 505 aaKnown RBP eCLIP8.94□□□□□ -0.98
SMAD4-204ENST00000586253 NT5C3AQ9H0P0 336 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 PRO3102Q9H379 93 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 DHX33Q9H6R0 707 aaKnown RBP8.94□□□□□ -0.98
SMAD4-204ENST00000586253 IL23AQ9NPF7 189 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 LIMD1Q9UGP4 676 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 FBXO2Q9UK22 296 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-204ENST00000586253 DBR1Q9UK59 544 aaKnown RBP8.94□□□□□ -0.98
SMAD4-204ENST00000586253 ZDHHC9Q9Y397 364 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 SQORQ9Y6N5 450 aa8.94□□□□□ -0.98
SMAD4-204ENST00000586253 TMEM150BA6NC51 233 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 M0QZ92 97 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 TERTO14746 1132 aaKnown RBP8.93□□□□□ -0.98
SMAD4-204ENST00000586253 SPTLC2O15270 562 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 RARRES1P49788 294 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 DNM2P50570 870 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 POLGP54098 1239 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-204ENST00000586253 NPEPPSP55786 919 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 MRPS6P82932 125 aaKnown RBP8.93□□□□□ -0.98
SMAD4-204ENST00000586253 CEBPZQ03701 1054 aaKnown RBP8.93□□□□□ -0.98
SMAD4-204ENST00000586253 MGAT3Q09327 533 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 STK38Q15208 465 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 XKR9Q5GH70 373 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 FOXD4L5Q5VV16 416 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-204ENST00000586253 PPP2R2DQ66LE6 453 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 PLA2G4FQ68DD2 849 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 EFCAB12Q6NXP0 572 aa8.93□□□□□ -0.98
SMAD4-204ENST00000586253 METTL13Q8N6R0 699 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms