RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 SSRP1Q08945 709 aaKnown RBP11.91□□□□□ -0.5
MBD3-203ENST00000585903 GIT2Q14161 759 aa11.91□□□□□ -0.5
MBD3-203ENST00000585903 CLUL1Q15846 466 aa11.91□□□□□ -0.5
MBD3-203ENST00000585903 ETNPPLQ8TBG4 499 aa11.91□□□□□ -0.5
MBD3-203ENST00000585903 MICAL1Q8TDZ2 1067 aa11.91□□□□□ -0.5
MBD3-203ENST00000585903 TBCKQ8TEA7 893 aa11.91□□□□□ -0.5
MBD3-203ENST00000585903 CEP89Q96ST8 783 aa11.91□□□□□ -0.5
MBD3-203ENST00000585903 NAP1L4Q99733 375 aaKnown RBP11.91□□□□□ -0.5
MBD3-203ENST00000585903 GCOM2Q9BZD3 368 aaPredicted RBP11.91□□□□□ -0.5
MBD3-203ENST00000585903 UNC45AQ9H3U1 944 aa11.91□□□□□ -0.5
MBD3-203ENST00000585903 RNF19AQ9NV58 838 aa11.91□□□□□ -0.5
MBD3-203ENST00000585903 VPS54Q9P1Q0 977 aa11.91□□□□□ -0.5
MBD3-203ENST00000585903 MUTYHQ9UIF7 546 aa11.91□□□□□ -0.5
MBD3-203ENST00000585903 IRAK3Q9Y616 596 aa11.91□□□□□ -0.5
MBD3-203ENST00000585903 CPLX1O14810 134 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 ZNF623O75123 536 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 GCFC2P16383 781 aaKnown RBP11.9□□□□□ -0.5
MBD3-203ENST00000585903 SFPQP23246 707 aaKnown RBP eCLIP11.9□□□□□ -0.5
MBD3-203ENST00000585903 MCM2P49736 904 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 NUBP1P53384 320 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 ERVFC1P60507 584 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 FOXK2Q01167 660 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 ITIH3Q06033 890 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 TOB2Q14106 344 aaPredicted RBP11.9□□□□□ -0.5
MBD3-203ENST00000585903 PPP4R3AQ6IN85 833 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 LRRC55Q6ZSA7 311 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 TRIM67Q6ZTA4 783 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 MIER3Q7Z3K6 550 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 BLIDQ8IZY5 108 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 PRSS33Q8NF86 280 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 CASP10Q92851 521 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 FAM20AQ96MK3 541 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 NECTIN4Q96NY8 510 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 S1PR5Q9H228 398 aa11.9□□□□□ -0.5
MBD3-203ENST00000585903 BARX2Q9UMQ3 279 aaPredicted RBP11.9□□□□□ -0.5
MBD3-203ENST00000585903 KMT2EQ8IZD2 1858 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 TBX3O15119 743 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 GAS2O43903 313 aaKnown RBP11.89□□□□□ -0.51
MBD3-203ENST00000585903 MAFO75444 373 aaPredicted RBP11.89□□□□□ -0.51
MBD3-203ENST00000585903 CDKL5O76039 1030 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 STBD1O95210 358 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 ALDH7A1P49419 539 aaKnown RBP11.89□□□□□ -0.51
MBD3-203ENST00000585903 POLGP54098 1239 aaPredicted RBP11.89□□□□□ -0.51
MBD3-203ENST00000585903 PSMC5P62195 406 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 ZXDAP98168 799 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 PPP2R5CQ13362 524 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 SMC1AQ14683 1233 aaKnown RBP11.89□□□□□ -0.51
MBD3-203ENST00000585903 NONOQ15233 471 aaKnown RBP eCLIP11.89□□□□□ -0.51
MBD3-203ENST00000585903 PCBP1Q15365 356 aaKnown RBP eCLIP11.89□□□□□ -0.51
MBD3-203ENST00000585903 UGCGQ16739 394 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 TPRNQ4KMQ1 711 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 CLLU1OSQ5K130 101 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 ANKRD54Q6NXT1 300 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 KRT25Q7Z3Z0 450 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 RBM23Q86U06 439 aaKnown RBP11.89□□□□□ -0.51
MBD3-203ENST00000585903 SLC39A11Q8N1S5 342 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 LRRC71Q8N4P6 559 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 MRPL43Q8N983 215 aaKnown RBP11.89□□□□□ -0.51
MBD3-203ENST00000585903 VN1R2Q8NFZ6 395 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 NLRP7Q8WX94 980 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 TCF25Q9BQ70 676 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 ENTPD7Q9NQZ7 604 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 SPTBN4Q9H254 2564 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 CACNA1HO95180 2353 aa11.89□□□□□ -0.51
MBD3-203ENST00000585903 STK36Q9NRP7 1315 aa11.88□□□□□ -0.51
MBD3-203ENST00000585903 PPFIA3O75145 1194 aa11.88□□□□□ -0.51
MBD3-203ENST00000585903 XBP1P17861 261 aa11.88□□□□□ -0.51
MBD3-203ENST00000585903 PHKA2P46019 1235 aa11.88□□□□□ -0.51
MBD3-203ENST00000585903 AK2P54819 239 aa11.88□□□□□ -0.51
MBD3-203ENST00000585903 CCT2P78371 535 aaKnown RBP11.88□□□□□ -0.51
MBD3-203ENST00000585903 SIGLEC14Q08ET2 396 aa11.88□□□□□ -0.51
MBD3-203ENST00000585903 NPY5RQ15761 445 aa11.88□□□□□ -0.51
MBD3-203ENST00000585903 ZSCAN31Q96LW9 406 aaPredicted RBP11.88□□□□□ -0.51
MBD3-203ENST00000585903 SCLT1Q96NL6 688 aa11.88□□□□□ -0.51
MBD3-203ENST00000585903 NCOA5Q9HCD5 579 aaKnown RBP11.88□□□□□ -0.51
MBD3-203ENST00000585903 KCNMB3Q9NPA1 279 aa11.88□□□□□ -0.51
MBD3-203ENST00000585903 DAXXQ9UER7 740 aaPredicted RBP11.88□□□□□ -0.51
MBD3-203ENST00000585903 NR2E1Q9Y466 385 aa11.88□□□□□ -0.51
MBD3-203ENST00000585903 TMEM221A6NGB7 291 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 M0R296 226 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 PER2O15055 1255 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 CHMP2AO43633 222 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 RFC5P40937 340 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 QARSP47897 775 aaKnown RBP11.87□□□□□ -0.51
MBD3-203ENST00000585903 PTPN5P54829 565 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 SYCE2Q6PIF2 218 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 TMC7Q7Z402 723 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 SLC7A3Q8WY07 619 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 PPP1R16BQ96T49 567 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 KIF2CQ99661 725 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 PHF20Q9BVI0 1012 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 IRF2BPLQ9H1B7 796 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 SLKQ9H2G2 1235 aaPredicted RBP11.87□□□□□ -0.51
MBD3-203ENST00000585903 DZANK1Q9NVP4 752 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 SEPT9Q9UHD8 586 aaPredicted RBP11.87□□□□□ -0.51
MBD3-203ENST00000585903 DDX25Q9UHL0 483 aaKnown RBP11.87□□□□□ -0.51
MBD3-203ENST00000585903 LIMCH1Q9UPQ0 1083 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 PCDHGC5Q9Y5F6 944 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 DMDP11532 3685 aa11.87□□□□□ -0.51
MBD3-203ENST00000585903 CNTNAP2Q9UHC6 1331 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms