RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 COL4A3BPQ9Y5P4 624 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 DNAH12Q6ZR08 3092 aa13.98□□□□□ -0.17
VMP1-202ENST00000585847 LTBP2Q14767 1821 aa13.97□□□□□ -0.17
VMP1-202ENST00000585847 SCN5AQ14524 2016 aa13.97□□□□□ -0.17
VMP1-202ENST00000585847 FRMD3A2A2Y4 597 aa13.97□□□□□ -0.17
VMP1-202ENST00000585847 TRIM43BA6NCK2 446 aa13.97□□□□□ -0.17
VMP1-202ENST00000585847 TBCAO75347 108 aaKnown RBP13.97□□□□□ -0.17
VMP1-202ENST00000585847 MAFO75444 373 aaPredicted RBP13.97□□□□□ -0.17
VMP1-202ENST00000585847 TPM3P06753 285 aa13.97□□□□□ -0.17
VMP1-202ENST00000585847 GUCY2CP25092 1073 aa13.97□□□□□ -0.17
VMP1-202ENST00000585847 ITGB8P26012 769 aa13.97□□□□□ -0.17
VMP1-202ENST00000585847 RBL2Q08999 1139 aa13.97□□□□□ -0.17
VMP1-202ENST00000585847 CUL4BQ13620 913 aa13.97□□□□□ -0.17
VMP1-202ENST00000585847 ALCAMQ13740 583 aa13.97□□□□□ -0.17
VMP1-202ENST00000585847 MCM6Q14566 821 aa13.97□□□□□ -0.17
VMP1-202ENST00000585847 ARSHQ5FYA8 562 aa13.97□□□□□ -0.17
VMP1-202ENST00000585847 NOC3LQ8WTT2 800 aaKnown RBP13.97□□□□□ -0.17
VMP1-202ENST00000585847 TRIM43Q96BQ3 446 aaPredicted RBP13.97□□□□□ -0.17
VMP1-202ENST00000585847 DHTKD1Q96HY7 919 aaPredicted RBP13.97□□□□□ -0.17
VMP1-202ENST00000585847 BHMT2Q9H2M3 363 aa13.97□□□□□ -0.17
VMP1-202ENST00000585847 UBE4BO95155 1302 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 UMODL1Q5DID0 1318 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 MROH7Q68CQ1 1323 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 CUL9Q8IWT3 2517 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 TANC1Q9C0D5 1861 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 SMIM35A0A1B0GVV1 85 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 KRT18P05783 430 aaKnown RBP13.96□□□□□ -0.17
VMP1-202ENST00000585847 PRR29P0C7W0 189 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 CLCN3P51790 818 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 MGAT3Q09327 533 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 PTK7Q13308 1070 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 IQCB1Q15051 598 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 RINT1Q6NUQ1 792 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 C1orf186Q6ZWK4 172 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 RPAINQ86UA6 219 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 GPBP1Q86WP2 473 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 KIAA0319LQ8IZA0 1049 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 LRRC71Q8N4P6 559 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 DDX12PQ92771 950 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 NOC4LQ9BVI4 516 aaKnown RBP13.96□□□□□ -0.17
VMP1-202ENST00000585847 RUSC1Q9BVN2 902 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 OSBPL7Q9BZF2 842 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 C17orf75Q9HAS0 396 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 OLFML3Q9NRN5 406 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 MTMR10Q9NXD2 777 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 PRKAG2Q9UGJ0 569 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 RWDD2AQ9UIY3 292 aa13.96□□□□□ -0.17
VMP1-202ENST00000585847 MYH11P35749 1972 aa13.96□□□□□ -0.18
VMP1-202ENST00000585847 ARHGEF35A5YM69 484 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 MAGEB2O15479 319 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 KLRC4O43908 158 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 USO1O60763 962 aaKnown RBP13.95□□□□□ -0.18
VMP1-202ENST00000585847 FGFR1OPO95684 399 aaKnown RBP13.95□□□□□ -0.18
VMP1-202ENST00000585847 CLTBP09497 229 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 MAPTP10636 758 aaKnown RBP13.95□□□□□ -0.18
VMP1-202ENST00000585847 GNAT1P11488 350 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 CYP11B2P19099 503 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 LRRC63Q05C16 580 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 EHHADHQ08426 723 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 TBC1D8BQ0IIM8 1120 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 PAK1Q13153 545 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 MAPK7Q13164 816 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 GPNMBQ14956 572 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 KMT5BQ4FZB7 885 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 EFCAB12Q6NXP0 572 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 PADI6Q6TGC4 694 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 C11orf57Q6ZUT1 292 aaPredicted RBP13.95□□□□□ -0.18
VMP1-202ENST00000585847 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.95□□□□□ -0.18
VMP1-202ENST00000585847 DAW1Q8N136 415 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 GUF1Q8N442 669 aaKnown RBP13.95□□□□□ -0.18
VMP1-202ENST00000585847 RNF214Q8ND24 703 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 ANKRD20A12PQ8NF67 263 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 TET1Q8NFU7 2136 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 DNAJB3Q8WWF6 145 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 VWCEQ96DN2 955 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 POLD4Q9HCU8 107 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 GPRC5CQ9NQ84 441 aa13.95□□□□□ -0.18
VMP1-202ENST00000585847 PHLPP2Q6ZVD8 1323 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 NPHP3-ACAD11A0A0J9YXS1 232 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 MYMKA6NI61 221 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 DCDC2CA8MYV0 355 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 H0YCG3 227 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 BIN1O00499 593 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 KIAA0355O15063 1070 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 TLR3O15455 904 aaKnown RBP13.94□□□□□ -0.18
VMP1-202ENST00000585847 CBFA2T2O43439 604 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 GAS2O43903 313 aaKnown RBP13.94□□□□□ -0.18
VMP1-202ENST00000585847 DGAT1O75907 488 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 ARL2P36404 184 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 RFC5P40937 340 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 HSP90AA2PQ14568 343 aaPredicted RBP13.94□□□□□ -0.18
VMP1-202ENST00000585847 EMC2Q15006 297 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 FAM26FQ5R3K3 315 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 FAM114A1Q8IWE2 563 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 GRAMD1CQ8IYS0 662 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 ADSSL1Q8N142 457 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 MCPH1Q8NEM0 835 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 DNAJC19Q96DA6 116 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 DRC1Q96MC2 740 aa13.94□□□□□ -0.18
VMP1-202ENST00000585847 WNT8AQ9H1J5 351 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms