RNA–Protein interactions for RNA: ENST00000585535.2

PTBP1-205, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-205ENST00000585535 TMEM117Q9H0C3 514 aa12.78□□□□□ -0.36
PTBP1-205ENST00000585535 NSUN3Q9H649 340 aaKnown RBP12.78□□□□□ -0.36
PTBP1-205ENST00000585535 UPF2Q9HAU5 1272 aaKnown RBP12.78□□□□□ -0.36
PTBP1-205ENST00000585535 RNF19AQ9NV58 838 aa12.78□□□□□ -0.36
PTBP1-205ENST00000585535 COL4A3BPQ9Y5P4 624 aa12.78□□□□□ -0.36
PTBP1-205ENST00000585535 ITGB1P05556 798 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 SPATA31C1P0DKV0 1188 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 SFPQP23246 707 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTBP1-205ENST00000585535 GATMP50440 423 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 POLGP54098 1239 aaPredicted RBP12.77□□□□□ -0.37
PTBP1-205ENST00000585535 CYP4A11Q02928 519 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 UBE3AQ05086 875 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 MXD4Q14582 209 aaPredicted RBP12.77□□□□□ -0.37
PTBP1-205ENST00000585535 CTC1Q2NKJ3 1217 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 LEXMQ3ZCV2 418 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 XKR9Q5GH70 373 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 KSR1Q8IVT5 923 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 PSPC1Q8WXF1 523 aaKnown RBP12.77□□□□□ -0.37
PTBP1-205ENST00000585535 ZNF668Q96K58 619 aaPredicted RBP12.77□□□□□ -0.37
PTBP1-205ENST00000585535 TBC1D32Q96NH3 1257 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 CASD1Q96PB1 797 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 POLR3CQ9BUI4 534 aaPredicted RBP12.77□□□□□ -0.37
PTBP1-205ENST00000585535 UBE2ZQ9H832 354 aaPredicted RBP12.77□□□□□ -0.37
PTBP1-205ENST00000585535 TUFT1Q9NNX1 390 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 AAASQ9NRG9 546 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 TYW1Q9NV66 732 aaKnown RBP12.77□□□□□ -0.37
PTBP1-205ENST00000585535 KIF3AQ9Y496 699 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 PCDHB12Q9Y5F1 795 aa12.77□□□□□ -0.37
PTBP1-205ENST00000585535 TBKBP1A7MCY6 615 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 CSDE1O75534 798 aaKnown RBP12.76□□□□□ -0.37
PTBP1-205ENST00000585535 DGAT1O75907 488 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 SKIP12755 728 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 MUTP22033 750 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 MCM7P33993 719 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 PHKA2P46019 1235 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 FOSBP53539 338 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 LAMTOR4Q0VGL1 99 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 PDIA5Q14554 519 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 EMC2Q15006 297 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 PAN2Q504Q3 1202 aaKnown RBP12.76□□□□□ -0.37
PTBP1-205ENST00000585535 FERMT3Q86UX7 667 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 IFNLR1Q8IU57 520 aaPredicted RBP12.76□□□□□ -0.37
PTBP1-205ENST00000585535 KLHL23Q8NBE8 558 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 ADAMTS19Q8TE59 1207 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 TMEM143Q96AN5 459 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 PABPC5Q96DU9 382 aaKnown RBP12.76□□□□□ -0.37
PTBP1-205ENST00000585535 TMX3Q96JJ7 454 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 SCLT1Q96NL6 688 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 CWH43Q9H720 699 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 ALG13Q9NP73 1137 aaKnown RBP12.76□□□□□ -0.37
PTBP1-205ENST00000585535 XPNPEP1Q9NQW7 623 aa12.76□□□□□ -0.37
PTBP1-205ENST00000585535 DBR1Q9UK59 544 aaKnown RBP12.76□□□□□ -0.37
PTBP1-205ENST00000585535 TCF20Q9UGU0 1960 aaKnown RBP12.76□□□□□ -0.37
PTBP1-205ENST00000585535 OR52Z1P0C646 297 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 FGFR1P11362 822 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 ATF7P17544 494 aaPredicted RBP12.75□□□□□ -0.37
PTBP1-205ENST00000585535 ATP2B1P20020 1258 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 FGFR4P22455 802 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 RPA1P27694 616 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 HOXA11P31270 313 aaPredicted RBP12.75□□□□□ -0.37
PTBP1-205ENST00000585535 ARL2P36404 184 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 RARRES1P49788 294 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 TOB1P50616 345 aaPredicted RBP12.75□□□□□ -0.37
PTBP1-205ENST00000585535 FXR2P51116 673 aaKnown RBP eCLIP12.75□□□□□ -0.37
PTBP1-205ENST00000585535 KCNQ1P51787 676 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 PTENP60484 403 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 PLCB3Q01970 1234 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 ZNF174Q15697 407 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 PUS10Q3MIT2 529 aaKnown RBP12.75□□□□□ -0.37
PTBP1-205ENST00000585535 TCEAL5Q5H9L2 206 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 TTC38Q5R3I4 469 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 PDE12Q6L8Q7 609 aaKnown RBP12.75□□□□□ -0.37
PTBP1-205ENST00000585535 LRRC55Q6ZSA7 311 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 MRPL10Q7Z7H8 261 aaKnown RBP12.75□□□□□ -0.37
PTBP1-205ENST00000585535 CATSPER3Q86XQ3 398 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 NACC1Q96RE7 527 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 MTRQ99707 1265 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 NFKBIZQ9BYH8 718 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 AGPAT5Q9NUQ2 364 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 NOL7Q9UMY1 257 aaKnown RBP12.75□□□□□ -0.37
PTBP1-205ENST00000585535 LZTS1Q9Y250 596 aa12.75□□□□□ -0.37
PTBP1-205ENST00000585535 CARNS1A5YM72 827 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 POTEMA6NI47 508 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 TNFRSF10AO00220 468 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 LAD1O00515 517 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 SRGAP2CP0DJJ0 459 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 LAG3P18627 525 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 DNAJB1P25685 340 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 LTBRP36941 435 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 TECP42680 631 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 RAB27AP51159 221 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 CLLU1OSQ5K130 101 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 CATSPER4Q7RTX7 472 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 ERMNQ8TAM6 284 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 NLRP4Q96MN2 994 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 UHRF1Q96T88 793 aaPredicted RBP12.74□□□□□ -0.37
PTBP1-205ENST00000585535 MINDY3Q9H8M7 445 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
PTBP1-205ENST00000585535 STK24Q9Y6E0 443 aa12.74□□□□□ -0.37
PTBP1-205ENST00000585535 MED24O75448 989 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms