RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 KBTBD13C9JR72 458 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 H0YCG3 227 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 PSMA7O14818 248 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 MYBP10242 640 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 CAPN2P17655 700 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 TMOD1P28289 359 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 DNM2P50570 870 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 CLCN3P51790 818 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 SMTNP53814 917 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 GTF2BQ00403 316 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 POU5F1BQ06416 359 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 PAK1Q13153 545 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 CAPSQ13938 189 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 CENPPQ6IPU0 288 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 STXBP4Q6ZWJ1 553 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 TMEM161BQ8NDZ6 487 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 PRPF31Q8WWY3 499 aaKnown RBP17.8■□□□□ 0.44
SS18-226ENST00000585241 ZBTB10Q96DT7 871 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 GLT1D1Q96MS3 346 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 MED15Q96RN5 788 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 SEZ6LQ9BYH1 1024 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 SUGCTQ9HAC7 445 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 CBX8Q9HC52 389 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 KMT5AQ9NQR1 393 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 RWDD2AQ9UIY3 292 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 EVPLQ92817 2033 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 CENPFP49454 3210 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 SIP14410 1827 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 A0A1W2PQ45 241 aaPredicted RBP17.79■□□□□ 0.44
SS18-226ENST00000585241 A0A1W2PQY0 241 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 K7ENM7 598 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 IKBKBO14920 756 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 GCNT3O95395 438 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 SGPL1O95470 568 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 CCNE1P24864 410 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 HOXD13P35453 343 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 LAMTOR4Q0VGL1 99 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 ITGA7Q13683 1181 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 NCAPHQ15003 741 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 ZCWPW2Q504Y3 356 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 CDCA2Q69YH5 1023 aaPredicted RBP17.79■□□□□ 0.44
SS18-226ENST00000585241 HAUS6Q7Z4H7 955 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 IFNLR1Q8IU57 520 aaPredicted RBP17.79■□□□□ 0.44
SS18-226ENST00000585241 DHX40Q8IX18 779 aaKnown RBP17.79■□□□□ 0.44
SS18-226ENST00000585241 KIAA0319LQ8IZA0 1049 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 METTL13Q8N6R0 699 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 ENOX1Q8TC92 643 aaKnown RBP17.79■□□□□ 0.44
SS18-226ENST00000585241 NFKBIZQ9BYH8 718 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 RBSNQ9H1K0 784 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 KCTD10Q9H3F6 313 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 PCDHB13Q9Y5F0 798 aa17.79■□□□□ 0.44
SS18-226ENST00000585241 SLC16A4O15374 487 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 TREHO43280 583 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 MYCNP04198 464 aaPredicted RBP17.78■□□□□ 0.44
SS18-226ENST00000585241 MNX1P50219 401 aaPredicted RBP17.78■□□□□ 0.44
SS18-226ENST00000585241 TFDP1Q14186 410 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 L1TD1Q5T7N2 865 aaKnown RBP17.78■□□□□ 0.44
SS18-226ENST00000585241 GDF6Q6KF10 455 aaPredicted RBP17.78■□□□□ 0.44
SS18-226ENST00000585241 TAF2Q6P1X5 1199 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 RPAINQ86UA6 219 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 ZNF710Q8N1W2 664 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 U2AF1L4Q8WU68 220 aaKnown RBP17.78■□□□□ 0.44
SS18-226ENST00000585241 NELFBQ8WX92 580 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 P2RX5Q93086 422 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 CTAGE1Q96RT6 745 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 MAP7D2Q96T17 732 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 SEMA6BQ9H3T3 888 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 TMEM134Q9H6X4 195 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 CTNND2Q9UQB3 1225 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 MAPK8IP1Q9UQF2 711 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 TRIP12Q14669 1992 aaPredicted RBP17.78■□□□□ 0.44
SS18-226ENST00000585241 ZMYM2Q9UBW7 1377 aa17.78■□□□□ 0.44
SS18-226ENST00000585241 PHLPP2Q6ZVD8 1323 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 A0A0U1RQG5 324 aaPredicted RBP17.77■□□□□ 0.44
SS18-226ENST00000585241 BICDL2A1A5D9 508 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 CCDC169A6NNP5 214 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 PRPF6O94906 941 aaKnown RBP17.77■□□□□ 0.44
SS18-226ENST00000585241 RPLP2P05387 115 aaKnown RBP17.77■□□□□ 0.44
SS18-226ENST00000585241 CYP2C9P11712 490 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 GJA8P48165 433 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 CHMP4BP1P59074 171 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 ZNF200P98182 395 aaPredicted RBP17.77■□□□□ 0.44
SS18-226ENST00000585241 CDC42EP1Q00587 391 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 MYL5Q02045 173 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 LRRC63Q05C16 580 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 GSE1Q14687 1217 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 KNOP1Q1ED39 458 aaKnown RBP17.77■□□□□ 0.44
SS18-226ENST00000585241 ZC2HC1CQ53FD0 456 aaPredicted RBP17.77■□□□□ 0.44
SS18-226ENST00000585241 KLHL10Q6JEL2 608 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 TTI2Q6NXR4 508 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 RUFY4Q6ZNE9 571 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 TAS1R3Q7RTX0 852 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 SERINC5Q86VE9 423 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 ZNF410Q86VK4 478 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 MAP4K3Q8IVH8 894 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 DEPTORQ8TB45 409 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 PPP1R13LQ8WUF5 828 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 KIFC3Q9BVG8 833 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 C2orf40Q9H1Z8 148 aa17.77■□□□□ 0.44
SS18-226ENST00000585241 STARD7Q9NQZ5 370 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms