RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 CDC25AP30304 524 aa18.07■□□□□ 0.48
ERBB2-222ENST00000584908 ERVK-21P61565 698 aa18.07■□□□□ 0.48
ERBB2-222ENST00000584908 NLRP4Q96MN2 994 aa18.07■□□□□ 0.48
ERBB2-222ENST00000584908 TRAIPQ9BWF2 469 aa18.07■□□□□ 0.48
ERBB2-222ENST00000584908 NFKBIZQ9BYH8 718 aa18.07■□□□□ 0.48
ERBB2-222ENST00000584908 ELAC1Q9H777 363 aaKnown RBP18.07■□□□□ 0.48
ERBB2-222ENST00000584908 CHST12Q9NRB3 414 aa18.07■□□□□ 0.48
ERBB2-222ENST00000584908 EYSQ5T1H1 3165 aa18.07■□□□□ 0.48
ERBB2-222ENST00000584908 USO1O60763 962 aaKnown RBP18.06■□□□□ 0.48
ERBB2-222ENST00000584908 CSDE1O75534 798 aaKnown RBP18.06■□□□□ 0.48
ERBB2-222ENST00000584908 HSP90AA1P07900 732 aaKnown RBP18.06■□□□□ 0.48
ERBB2-222ENST00000584908 CYP11B2P19099 503 aa18.06■□□□□ 0.48
ERBB2-222ENST00000584908 LONP1P36776 959 aaKnown RBP18.06■□□□□ 0.48
ERBB2-222ENST00000584908 PTENP60484 403 aa18.06■□□□□ 0.48
ERBB2-222ENST00000584908 PCBP1Q15365 356 aaKnown RBP eCLIP18.06■□□□□ 0.482e-7■■□□□ 11.8
ERBB2-222ENST00000584908 PADI6Q6TGC4 694 aa18.06■□□□□ 0.48
ERBB2-222ENST00000584908 MYLIPQ8WY64 445 aa18.06■□□□□ 0.48
ERBB2-222ENST00000584908 TGS1Q96RS0 853 aaKnown RBP18.06■□□□□ 0.48
ERBB2-222ENST00000584908 YME1L1Q96TA2 773 aa18.06■□□□□ 0.48
ERBB2-222ENST00000584908 PRDM12Q9H4Q4 367 aa18.06■□□□□ 0.48
ERBB2-222ENST00000584908 CLIC4Q9Y696 253 aa18.06■□□□□ 0.48
ERBB2-222ENST00000584908 ADGRA3Q8IWK6 1321 aa18.06■□□□□ 0.48
ERBB2-222ENST00000584908 COL4A4P53420 1690 aaPredicted RBP18.06■□□□□ 0.48
ERBB2-222ENST00000584908 ARHGEF35A5YM69 484 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 EYA4O95677 639 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 LINC00271P0C7V0 271 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 SRGAP2CP0DJJ0 459 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 ZSCAN20P17040 1043 aaPredicted RBP18.05■□□□□ 0.48
ERBB2-222ENST00000584908 FGFR4P22455 802 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 GLRA2P23416 452 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 CAPSQ13938 189 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 FAM173BQ6P4H8 233 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 SPRED2Q7Z698 418 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 RNF149Q8NC42 400 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 ASAP3Q8TDY4 903 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 NT5C3AQ9H0P0 336 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 BHMT2Q9H2M3 363 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 MINDY3Q9H8M7 445 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 TMEM161AQ9NX61 479 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 DNM3Q9UQ16 869 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 REV3LO60673 3130 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 KIAA1671Q9BY89 1806 aa18.05■□□□□ 0.48
ERBB2-222ENST00000584908 A0A0U1RQF3 1178 aa18.04■□□□□ 0.48
ERBB2-222ENST00000584908 POU3F3P20264 500 aaPredicted RBP18.04■□□□□ 0.48
ERBB2-222ENST00000584908 PHKA2P46019 1235 aa18.04■□□□□ 0.48
ERBB2-222ENST00000584908 GRB10Q13322 594 aa18.04■□□□□ 0.48
ERBB2-222ENST00000584908 TFDP1Q14186 410 aa18.04■□□□□ 0.48
ERBB2-222ENST00000584908 TMEM119Q4V9L6 283 aa18.04■□□□□ 0.48
ERBB2-222ENST00000584908 KCNK18Q7Z418 384 aa18.04■□□□□ 0.48
ERBB2-222ENST00000584908 CLP1Q92989 425 aaKnown RBP18.04■□□□□ 0.48
ERBB2-222ENST00000584908 SAMD11Q96NU1 681 aa18.04■□□□□ 0.48
ERBB2-222ENST00000584908 PNMA5Q96PV4 448 aa18.04■□□□□ 0.48
ERBB2-222ENST00000584908 POLR3FQ9H1D9 316 aaPredicted RBP18.04■□□□□ 0.48
ERBB2-222ENST00000584908 AGPAT5Q9NUQ2 364 aa18.04■□□□□ 0.48
ERBB2-222ENST00000584908 DACT1Q9NYF0 836 aa18.04■□□□□ 0.48
ERBB2-222ENST00000584908 PRUNE2Q8WUY3 3088 aa18.03■□□□□ 0.48
ERBB2-222ENST00000584908 EPOPA6NHQ4 379 aa18.03■□□□□ 0.48
ERBB2-222ENST00000584908 E9PMD0 336 aa18.03■□□□□ 0.48
ERBB2-222ENST00000584908 NASPP49321 788 aaPredicted RBP18.03■□□□□ 0.48
ERBB2-222ENST00000584908 GRIN1Q05586 938 aa18.03■□□□□ 0.48
ERBB2-222ENST00000584908 ADGRE1Q14246 886 aa18.03■□□□□ 0.48
ERBB2-222ENST00000584908 SLC39A14Q15043 492 aa18.03■□□□□ 0.48
ERBB2-222ENST00000584908 CATSPER4Q7RTX7 472 aa18.03■□□□□ 0.48
ERBB2-222ENST00000584908 ZNF598Q86UK7 904 aaKnown RBP18.03■□□□□ 0.48
ERBB2-222ENST00000584908 CMTR2Q8IYT2 770 aaKnown RBP18.03■□□□□ 0.48
ERBB2-222ENST00000584908 USP28Q96RU2 1077 aa18.03■□□□□ 0.48
ERBB2-222ENST00000584908 GAS2L1Q99501 681 aaPredicted RBP18.03■□□□□ 0.48
ERBB2-222ENST00000584908 GPRC5CQ9NQ84 441 aa18.03■□□□□ 0.48
ERBB2-222ENST00000584908 FBXO2Q9UK22 296 aaPredicted RBP18.03■□□□□ 0.48
ERBB2-222ENST00000584908 PCDHB7Q9Y5E2 793 aa18.03■□□□□ 0.48
ERBB2-222ENST00000584908 SRPRBQ9Y5M8 271 aaKnown RBP18.03■□□□□ 0.48
ERBB2-222ENST00000584908 ZSCAN22P10073 491 aaPredicted RBP18.02■□□□□ 0.48
ERBB2-222ENST00000584908 FOSL2P15408 326 aa18.02■□□□□ 0.48
ERBB2-222ENST00000584908 CDCA2Q69YH5 1023 aaPredicted RBP18.02■□□□□ 0.48
ERBB2-222ENST00000584908 CABP7Q86V35 215 aa18.02■□□□□ 0.48
ERBB2-222ENST00000584908 ECHDC2Q86YB7 292 aa18.02■□□□□ 0.48
ERBB2-222ENST00000584908 FIBCD1Q8N539 461 aa18.02■□□□□ 0.48
ERBB2-222ENST00000584908 LRFN2Q9ULH4 789 aa18.02■□□□□ 0.48
ERBB2-222ENST00000584908 MYH11P35749 1972 aa18.02■□□□□ 0.48
ERBB2-222ENST00000584908 PRRC2BQ5JSZ5 2229 aaKnown RBP18.01■□□□□ 0.47
ERBB2-222ENST00000584908 LPXNO60711 386 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 ZNF623O75123 536 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 EOMESO95936 686 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 AXLP30530 894 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 HOXA11P31270 313 aaPredicted RBP18.01■□□□□ 0.47
ERBB2-222ENST00000584908 UBA7P41226 1012 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 MBTD1Q05BQ5 628 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 AMHR2Q16671 573 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 FAM102BQ5T8I3 360 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 RINT1Q6NUQ1 792 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 C1orf186Q6ZWK4 172 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 ARNTL2Q8WYA1 636 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 KIFAP3Q92845 792 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 C17orf80Q9BSJ5 609 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 CCSER1Q9C0I3 900 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 CERS4Q9HA82 394 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 PIN4Q9Y237 131 aaKnown RBP18.01■□□□□ 0.47
ERBB2-222ENST00000584908 RWDD3Q9Y3V2 267 aa18.01■□□□□ 0.47
ERBB2-222ENST00000584908 C5orf67F2Z3F1 127 aa18■□□□□ 0.47
ERBB2-222ENST00000584908 HOXA2O43364 376 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms