RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 EMC2Q15006 297 aa20.14■□□□□ 0.81
SRSF1-208ENST00000584773 LONRF3Q496Y0 759 aa20.14■□□□□ 0.81
SRSF1-208ENST00000584773 CLLU1OSQ5K130 101 aa20.14■□□□□ 0.81
SRSF1-208ENST00000584773 LRRC55Q6ZSA7 311 aa20.14■□□□□ 0.81
SRSF1-208ENST00000584773 FAM184AQ8NB25 1140 aa20.14■□□□□ 0.81
SRSF1-208ENST00000584773 FBXO18Q8NFZ0 1043 aa20.14■□□□□ 0.81
SRSF1-208ENST00000584773 SLC7A3Q8WY07 619 aa20.14■□□□□ 0.81
SRSF1-208ENST00000584773 P2RX5Q93086 422 aa20.14■□□□□ 0.81
SRSF1-208ENST00000584773 CASD1Q96PB1 797 aa20.14■□□□□ 0.81
SRSF1-208ENST00000584773 HSD17B14Q9BPX1 270 aa20.14■□□□□ 0.81
SRSF1-208ENST00000584773 CWH43Q9H720 699 aa20.14■□□□□ 0.81
SRSF1-208ENST00000584773 ELAC1Q9H777 363 aaKnown RBP20.14■□□□□ 0.81
SRSF1-208ENST00000584773 XPNPEP1Q9NQW7 623 aa20.14■□□□□ 0.81
SRSF1-208ENST00000584773 COL4A3BPQ9Y5P4 624 aa20.14■□□□□ 0.81
SRSF1-208ENST00000584773 SRGAP2CP0DJJ0 459 aa20.13■□□□□ 0.81
SRSF1-208ENST00000584773 PBX3P40426 434 aa20.13■□□□□ 0.81
SRSF1-208ENST00000584773 HMGN5P82970 282 aaKnown RBP20.13■□□□□ 0.81
SRSF1-208ENST00000584773 HYAL1Q12794 435 aa20.13■□□□□ 0.81
SRSF1-208ENST00000584773 RABEP1Q15276 862 aa20.13■□□□□ 0.81
SRSF1-208ENST00000584773 ADGRD2Q7Z7M1 963 aa20.13■□□□□ 0.81
SRSF1-208ENST00000584773 ZNF410Q86VK4 478 aa20.13■□□□□ 0.81
SRSF1-208ENST00000584773 ZNF710Q8N1W2 664 aa20.13■□□□□ 0.81
SRSF1-208ENST00000584773 COLGALT1Q8NBJ5 622 aa20.13■□□□□ 0.81
SRSF1-208ENST00000584773 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.13■□□□□ 0.81
SRSF1-208ENST00000584773 POF1BQ8WVV4 589 aa20.13■□□□□ 0.81
SRSF1-208ENST00000584773 PRPF31Q8WWY3 499 aaKnown RBP20.13■□□□□ 0.81
SRSF1-208ENST00000584773 LMAN2LQ9H0V9 348 aa20.13■□□□□ 0.81
SRSF1-208ENST00000584773 MINDY3Q9H8M7 445 aa20.13■□□□□ 0.81
SRSF1-208ENST00000584773 IFT122Q9HBG6 1241 aa20.13■□□□□ 0.81
SRSF1-208ENST00000584773 LINC01565O15544 149 aa20.12■□□□□ 0.81
SRSF1-208ENST00000584773 RFC5P40937 340 aa20.12■□□□□ 0.81
SRSF1-208ENST00000584773 ZNF598Q86UK7 904 aaKnown RBP20.12■□□□□ 0.81
SRSF1-208ENST00000584773 HELQQ8TDG4 1101 aa20.12■□□□□ 0.81
SRSF1-208ENST00000584773 PIGOQ8TEQ8 1089 aa20.12■□□□□ 0.81
SRSF1-208ENST00000584773 PSPC1Q8WXF1 523 aaKnown RBP20.12■□□□□ 0.81
SRSF1-208ENST00000584773 LPPQ93052 612 aa20.12■□□□□ 0.81
SRSF1-208ENST00000584773 JPH2Q9BR39 696 aaPredicted RBP20.12■□□□□ 0.81
SRSF1-208ENST00000584773 TMEM117Q9H0C3 514 aa20.12■□□□□ 0.81
SRSF1-208ENST00000584773 FOXP1Q9H334 677 aaPredicted RBP20.12■□□□□ 0.81
SRSF1-208ENST00000584773 IGFLR1Q9H665 355 aa20.12■□□□□ 0.81
SRSF1-208ENST00000584773 CLDND1Q9NY35 253 aa20.12■□□□□ 0.81
SRSF1-208ENST00000584773 PIN4Q9Y237 131 aaKnown RBP20.12■□□□□ 0.81
SRSF1-208ENST00000584773 A0A0U1RQF3 1178 aa20.11■□□□□ 0.81
SRSF1-208ENST00000584773 MEIS3P2A8K0S8 358 aa20.11■□□□□ 0.81
SRSF1-208ENST00000584773 IL9P15248 144 aa20.11■□□□□ 0.81
SRSF1-208ENST00000584773 SFPQP23246 707 aaKnown RBP eCLIP20.11■□□□□ 0.81
SRSF1-208ENST00000584773 DLX2Q07687 328 aaPredicted RBP20.11■□□□□ 0.81
SRSF1-208ENST00000584773 LAMTOR4Q0VGL1 99 aa20.11■□□□□ 0.81
SRSF1-208ENST00000584773 LEXMQ3ZCV2 418 aa20.11■□□□□ 0.81
SRSF1-208ENST00000584773 OTUD6AQ7L8S5 288 aa20.11■□□□□ 0.81
SRSF1-208ENST00000584773 CATSPER4Q7RTX7 472 aa20.11■□□□□ 0.81
SRSF1-208ENST00000584773 PABPC5Q96DU9 382 aaKnown RBP20.11■□□□□ 0.81
SRSF1-208ENST00000584773 MTRQ99707 1265 aa20.11■□□□□ 0.81
SRSF1-208ENST00000584773 MED24O75448 989 aa20.1■□□□□ 0.81
SRSF1-208ENST00000584773 SPATA31C1P0DKV0 1188 aa20.1■□□□□ 0.81
SRSF1-208ENST00000584773 TECP42680 631 aa20.1■□□□□ 0.81
SRSF1-208ENST00000584773 CDC42EP1Q00587 391 aa20.1■□□□□ 0.81
SRSF1-208ENST00000584773 GNL2Q13823 731 aaKnown RBP20.1■□□□□ 0.81
SRSF1-208ENST00000584773 COL19A1Q14993 1142 aa20.1■□□□□ 0.81
SRSF1-208ENST00000584773 TTC38Q5R3I4 469 aa20.1■□□□□ 0.81
SRSF1-208ENST00000584773 TWF2Q6IBS0 349 aaKnown RBP20.1■□□□□ 0.81
SRSF1-208ENST00000584773 FAM43BQ6ZT52 329 aaPredicted RBP20.1■□□□□ 0.81
SRSF1-208ENST00000584773 NOSTRINQ8IVI9 506 aa20.1■□□□□ 0.81
SRSF1-208ENST00000584773 NEK9Q8TD19 979 aa20.1■□□□□ 0.81
SRSF1-208ENST00000584773 ASAP3Q8TDY4 903 aa20.1■□□□□ 0.81
SRSF1-208ENST00000584773 RNF216Q9NWF9 866 aaPredicted RBP20.1■□□□□ 0.81
SRSF1-208ENST00000584773 PCDHB12Q9Y5F1 795 aa20.1■□□□□ 0.81
SRSF1-208ENST00000584773 FGF18O76093 207 aa20.09■□□□□ 0.81
SRSF1-208ENST00000584773 LYPLA2O95372 231 aa20.09■□□□□ 0.81
SRSF1-208ENST00000584773 OR52Z1P0C646 297 aa20.09■□□□□ 0.81
SRSF1-208ENST00000584773 LTBRP36941 435 aa20.09■□□□□ 0.81
SRSF1-208ENST00000584773 PHKA2P46019 1235 aa20.09■□□□□ 0.81
SRSF1-208ENST00000584773 CLUL1Q15846 466 aa20.09■□□□□ 0.81
SRSF1-208ENST00000584773 NAALADL2Q58DX5 795 aa20.09■□□□□ 0.81
SRSF1-208ENST00000584773 FERMT3Q86UX7 667 aa20.09■□□□□ 0.81
SRSF1-208ENST00000584773 THNSL1Q8IYQ7 743 aa20.09■□□□□ 0.81
SRSF1-208ENST00000584773 ABI1Q8IZP0 508 aa20.09■□□□□ 0.81
SRSF1-208ENST00000584773 RNF149Q8NC42 400 aa20.09■□□□□ 0.81
SRSF1-208ENST00000584773 DACT1Q9NYF0 836 aa20.09■□□□□ 0.81
SRSF1-208ENST00000584773 PPME1Q9Y570 386 aa20.09■□□□□ 0.81
SRSF1-208ENST00000584773 RARRES1P49788 294 aa20.08■□□□□ 0.81
SRSF1-208ENST00000584773 ERVFC1P60507 584 aa20.08■□□□□ 0.81
SRSF1-208ENST00000584773 PTCRAQ6ISU1 281 aaPredicted RBP20.08■□□□□ 0.81
SRSF1-208ENST00000584773 RBM23Q86U06 439 aaKnown RBP20.08■□□□□ 0.81
SRSF1-208ENST00000584773 CATSPER3Q86XQ3 398 aa20.08■□□□□ 0.81
SRSF1-208ENST00000584773 LRRC43Q8N309 656 aa20.08■□□□□ 0.81
SRSF1-208ENST00000584773 TMX3Q96JJ7 454 aa20.08■□□□□ 0.81
SRSF1-208ENST00000584773 INO80BQ9C086 356 aaPredicted RBP20.08■□□□□ 0.81
SRSF1-208ENST00000584773 CD320Q9NPF0 282 aa20.08■□□□□ 0.81
SRSF1-208ENST00000584773 CHST12Q9NRB3 414 aa20.08■□□□□ 0.81
SRSF1-208ENST00000584773 ANKEF1Q9NU02 776 aa20.08■□□□□ 0.81
SRSF1-208ENST00000584773 AGPAT5Q9NUQ2 364 aa20.08■□□□□ 0.81
SRSF1-208ENST00000584773 BDP1A6H8Y1 2624 aa20.07■□□□□ 0.8
SRSF1-208ENST00000584773 HOXA2O43364 376 aa20.07■□□□□ 0.8
SRSF1-208ENST00000584773 ST18O60284 1047 aa20.07■□□□□ 0.8
SRSF1-208ENST00000584773 USO1O60763 962 aaKnown RBP20.07■□□□□ 0.8
SRSF1-208ENST00000584773 TBX10O75333 385 aa20.07■□□□□ 0.8
SRSF1-208ENST00000584773 LAG3P18627 525 aa20.07■□□□□ 0.8
SRSF1-208ENST00000584773 TOB1P50616 345 aaPredicted RBP20.07■□□□□ 0.8
SRSF1-208ENST00000584773 CTC1Q2NKJ3 1217 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms