RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 MMEL1Q495T6 779 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 PABPC1LQ4VXU2 614 aaKnown RBP11.03□□□□□ -0.64
CDH8-211ENST00000584337 EPM2AIP1Q7L775 607 aaPredicted RBP11.03□□□□□ -0.64
CDH8-211ENST00000584337 FANCBQ8NB91 859 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 ZCRB1Q8TBF4 217 aaKnown RBP11.03□□□□□ -0.64
CDH8-211ENST00000584337 XAGE3Q8WTP9 111 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 CKAP2Q8WWK9 683 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 KCNMB3Q9NPA1 279 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 ATP6V0A2Q9Y487 856 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 CES2O00748 559 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 PYGMP11217 842 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 NEK2P51955 445 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 PPIDQ08752 370 aaKnown RBP11.03□□□□□ -0.64
CDH8-211ENST00000584337 ITGA9Q13797 1035 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 ANKRD40Q6AI12 368 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 TMTC3Q6ZXV5 915 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 SREK1Q8WXA9 508 aaKnown RBP11.03□□□□□ -0.64
CDH8-211ENST00000584337 DGCR14Q96DF8 476 aaKnown RBP11.03□□□□□ -0.64
CDH8-211ENST00000584337 CORO1BQ9BR76 489 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 MTA3Q9BTC8 594 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 LRRC27Q9C0I9 530 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 PALLDQ8WX93 1383 aa11.03□□□□□ -0.64
CDH8-211ENST00000584337 ARHGAP42A6NI28 874 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 KCNQ3O43525 872 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 ASMTLO95671 621 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 ITGA4P13612 1032 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 PCYT1AP49585 367 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 ERFP50548 548 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 DHX34Q14147 1143 aaKnown RBP11.02□□□□□ -0.64
CDH8-211ENST00000584337 MTFR1Q15390 333 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 ANKRD13DQ6ZTN6 518 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 COPS6Q7L5N1 327 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 UBL4BQ8N7F7 174 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 USP6NLQ92738 828 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 NDEL1Q9GZM8 345 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 SEMA4AQ9H3S1 761 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 GOLPH3Q9H4A6 298 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 CEP72Q9P209 647 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 SERPINA10Q9UK55 444 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 USP20Q9Y2K6 914 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 ADGRB1O14514 1584 aa11.02□□□□□ -0.64
CDH8-211ENST00000584337 A6NJR5 290 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 PLS1Q14651 629 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 FAM83BQ5T0W9 1011 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 ASRGL1Q7L266 308 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 IRF2BP1Q8IU81 584 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 PHC3Q8NDX5 983 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 FBXO25Q8TCJ0 367 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 SCFD2Q8WU76 684 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 RSPH1Q8WYR4 309 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 FAM196BA6NMK8 535 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 NEURL1BA8MQ27 555 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 UBE2Q2LH0YL09 131 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 PRDM1O75626 825 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 DNAJC3Q13217 504 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 KHDC1Q4VXA5 237 aaKnown RBP11.02□□□□□ -0.65
CDH8-211ENST00000584337 METTL24Q5JXM2 366 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 ALKBH5Q6P6C2 394 aaKnown RBP11.02□□□□□ -0.65
CDH8-211ENST00000584337 C1orf228Q6PIY5 440 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 ECHDC2Q86YB7 292 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 CCDC110Q8TBZ0 833 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 ESR2Q92731 530 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 BRD8Q9H0E9 1235 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 ZHX3Q9H4I2 956 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 DISC1Q9NRI5 854 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 DCTN4Q9UJW0 460 aa11.02□□□□□ -0.65
CDH8-211ENST00000584337 SOS2Q07890 1332 aaPredicted RBP11.02□□□□□ -0.65
CDH8-211ENST00000584337 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 PMS1P54277 932 aaKnown RBP11.01□□□□□ -0.65
CDH8-211ENST00000584337 GRAMD1BQ3KR37 738 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 C1orf146Q5VVC0 180 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 TTI2Q6NXR4 508 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 C16orf87Q6PH81 154 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 CCDC125Q86Z20 511 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 WDR75Q8IWA0 830 aaKnown RBP11.01□□□□□ -0.65
CDH8-211ENST00000584337 ZNF654Q8IZM8 581 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 U2AF1L4Q8WU68 220 aaKnown RBP11.01□□□□□ -0.65
CDH8-211ENST00000584337 ARHGEF1Q92888 912 aaKnown RBP11.01□□□□□ -0.65
CDH8-211ENST00000584337 AGBL1Q96MI9 1066 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 PTTG2Q9NZH5 202 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 PPP1R1BQ9UD71 204 aaPredicted RBP11.01□□□□□ -0.65
CDH8-211ENST00000584337 SALL4Q9UJQ4 1053 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.01□□□□□ -0.65
CDH8-211ENST00000584337 TNRQ92752 1358 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 MINDY4BA8MYZ0 360 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 RASA4BC9J798 803 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 RASA4O43374 803 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 GAS8O95995 478 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 HSPA6P17066 643 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 TMED2Q15363 201 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 LRRC36Q1X8D7 754 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 PROSER3Q2NL68 480 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 TAF1BQ53T94 588 aaPredicted RBP11.01□□□□□ -0.65
CDH8-211ENST00000584337 DDX17Q92841 729 aaKnown RBP11.01□□□□□ -0.65
CDH8-211ENST00000584337 TUBGCP5Q96RT8 1024 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 TBC1D23Q9NUY8 699 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 SUN2Q9UH99 717 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 SCINQ9Y6U3 715 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 A0A0G2JND7 137 aa11.01□□□□□ -0.65
CDH8-211ENST00000584337 TMEM247A6NEH6 219 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms