RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 POF1BQ8WVV4 589 aa15.23■□□□□ 0.03
CDK5RAP3-233ENST00000584186 PRPF31Q8WWY3 499 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-233ENST00000584186 PABPC5Q96DU9 382 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-233ENST00000584186 CCDC43Q96MW1 224 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-233ENST00000584186 EIF2AK1Q9BQI3 630 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-233ENST00000584186 INO80BQ9C086 356 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-233ENST00000584186 TMEM117Q9H0C3 514 aa15.23■□□□□ 0.03
CDK5RAP3-233ENST00000584186 SH2B1Q9NRF2 756 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-233ENST00000584186 DACT1Q9NYF0 836 aa15.23■□□□□ 0.03
CDK5RAP3-233ENST00000584186 COL4A3BPQ9Y5P4 624 aa15.23■□□□□ 0.03
CDK5RAP3-233ENST00000584186 SLITRK3O94933 977 aa15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 GTF2F1P35269 517 aaKnown RBP eCLIP15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 IRS1P35568 1242 aa15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 HMGN5P82970 282 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 HYAL1Q12794 435 aa15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 CAMK1Q14012 370 aa15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 EMC2Q15006 297 aa15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 LONRF3Q496Y0 759 aa15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 TWF2Q6IBS0 349 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 PTCRAQ6ISU1 281 aaPredicted RBP15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 CATSPER4Q7RTX7 472 aa15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 MICAL1Q8TDZ2 1067 aa15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 PSPC1Q8WXF1 523 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 CASD1Q96PB1 797 aa15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 TMEM60Q9H2L4 133 aa15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 PIN4Q9Y237 131 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 PPME1Q9Y570 386 aa15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 KIAA1671Q9BY89 1806 aa15.22■□□□□ 0.03
CDK5RAP3-233ENST00000584186 A0A087WWV3 80 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 A0A0U1RQF3 1178 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 NCK2O43639 380 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 FGF18O76093 207 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 LAG3P18627 525 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 LAMTOR4Q0VGL1 99 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 CLUL1Q15846 466 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 LRRC55Q6ZSA7 311 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 COLGALT1Q8NBJ5 622 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 HELQQ8TDG4 1101 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 PPP2R3CQ969Q6 453 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 MTMR9Q96QG7 549 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 DHX33Q9H6R0 707 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 CWH43Q9H720 699 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 CHST12Q9NRB3 414 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 RNF19AQ9NV58 838 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 PCDHGC5Q9Y5F6 944 aa15.21■□□□□ 0.03
CDK5RAP3-233ENST00000584186 BDP1A6H8Y1 2624 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 POTEMA6NI47 508 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 EOMESO95936 686 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 IL9P15248 144 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 PBX3P40426 434 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 PHKA2P46019 1235 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 RBM25P49756 843 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 ZNF174Q15697 407 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 CLLU1OSQ5K130 101 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 ADGRD2Q7Z7M1 963 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 RBM23Q86U06 439 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 LRRC43Q8N309 656 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 FBXO18Q8NFZ0 1043 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 NEK9Q8TD19 979 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 TCP11Q8WWU5 503 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 MTRQ99707 1265 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 HSD17B14Q9BPX1 270 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 FOXP1Q9H334 677 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 IFT122Q9HBG6 1241 aa15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 FNDC1Q4ZHG4 1894 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-233ENST00000584186 C5orf42Q9H799 3197 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 MYO7AQ13402 2215 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 BRWD1Q9NSI6 2320 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 LINC01565O15544 149 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 GAS2O43903 313 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 ATF7P17544 494 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 TECP42680 631 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 NRIP1P48552 1158 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 RABEP1Q15276 862 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 CSPP1Q1MSJ5 1256 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 PUS10Q3MIT2 529 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 ZNF598Q86UK7 904 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 FERMT3Q86UX7 667 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 RNF149Q8NC42 400 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 PIGOQ8TEQ8 1089 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 LPPQ93052 612 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 ZNF558Q96NG5 402 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 UPF2Q9HAU5 1272 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 TLR9Q9NR96 1032 aa15.19■□□□□ 0.02
CDK5RAP3-233ENST00000584186 ATG2AQ2TAZ0 1938 aa15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 GRXCR2A6NFK2 248 aa15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 ST18O60284 1047 aa15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 LYPLA2O95372 231 aa15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 OR52Z1P0C646 297 aa15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 SKIP12755 728 aa15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 LTBRP36941 435 aa15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 NDUFV1P49821 464 aa15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 DLX2Q07687 328 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 COL19A1Q14993 1142 aa15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 KCNT2Q6UVM3 1135 aa15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 SRGAP1Q7Z6B7 1085 aa15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 NOSTRINQ8IVI9 506 aa15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 TLE6Q9H808 572 aa15.18■□□□□ 0.02
CDK5RAP3-233ENST00000584186 MINDY3Q9H8M7 445 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms