RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 SCLT1Q96NL6 688 aa16.69■□□□□ 0.26
CDK5RAP3-226ENST00000583182 MRPL9Q9BYD2 267 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-226ENST00000583182 ZBP1Q9H171 429 aa16.69■□□□□ 0.26
CDK5RAP3-226ENST00000583182 NRBP2Q9NSY0 501 aa16.69■□□□□ 0.26
CDK5RAP3-226ENST00000583182 PTPRZ1P23471 2315 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 MSH4O15457 936 aa16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 CPA1P15085 419 aa16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 EPCAMP16422 314 aa16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 ALDH7A1P49419 539 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 TARBP2Q15633 366 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 KIAA1841Q6NSI8 718 aa16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 ASCL5Q7RTU5 278 aa16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 VPS52Q8N1B4 723 aa16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 CCDC12Q8WUD4 166 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 NLRP7Q8WX94 980 aa16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 TMEM169Q96HH4 297 aa16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 DACT1Q9NYF0 836 aa16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 DMDP11532 3685 aa16.68■□□□□ 0.26
CDK5RAP3-226ENST00000583182 PRPF3O43395 683 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 CHMP2AO43633 222 aa16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 ZC3H11AO75152 810 aaKnown RBP eCLIP16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 GNA11P29992 359 aa16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 PHKA2P46019 1235 aa16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 TBC1D8BQ0IIM8 1120 aa16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 SKAP1Q86WV1 359 aa16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 ZDHHC14Q8IZN3 488 aa16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 TDRD5Q8NAT2 981 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 SLC22A17Q8WUG5 538 aa16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 BCL7CQ8WUZ0 217 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 LPPQ93052 612 aa16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 GJA10Q969M2 543 aa16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 UNC45AQ9H3U1 944 aa16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 LIMD1Q9UGP4 676 aa16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 IRAK3Q9Y616 596 aa16.67■□□□□ 0.26
CDK5RAP3-226ENST00000583182 SPTBN4Q9H254 2564 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 CCDC196A0A1B0GTZ2 297 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 TMEM150BA6NC51 233 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 MEIS3P2A8K0S8 358 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 CTSAP10619 480 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 KRT32Q14532 448 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 BMS1Q14692 1282 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 LONRF3Q496Y0 759 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 ATAT1Q5SQI0 421 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 SLC5A5Q92911 643 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 PHKBQ93100 1093 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 IGSF21Q96ID5 467 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 CCDC136Q96JN2 1154 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 CEP89Q96ST8 783 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 RIT2Q99578 217 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 GCOM2Q9BZD3 368 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 NRDE2Q9H7Z3 1164 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 CHST12Q9NRB3 414 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 DZANK1Q9NVP4 752 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 DBR1Q9UK59 544 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 C2orf16Q68DN1 1984 aa16.66■□□□□ 0.26
CDK5RAP3-226ENST00000583182 RIF1Q5UIP0 2472 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 NID2Q14112 1375 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 A0A087WZ62 844 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 GAS7O60861 476 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 STBD1O95210 358 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 GALTP07902 379 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 SFNP31947 248 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 NBL1P41271 181 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 JAK3P52333 1124 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 POLGP54098 1239 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 MTERF2Q49AM1 385 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 BMP2KLQ5H9B9 411 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 LRCH2Q5VUJ6 765 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 ASTLQ6HA08 431 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 Q6ZUG5 572 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 DDX53Q86TM3 631 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 BRF1Q92994 677 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 SH2D3AQ9BRG2 576 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 FDXACB1Q9BRP7 624 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 TRAIPQ9BWF2 469 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 VN1R3Q9BXE9 311 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 TEKT3Q9BXF9 490 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 NIFKQ9BYG3 293 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 TBC1D13Q9NVG8 400 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 SEPT9Q9UHD8 586 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 USTQ9Y2C2 406 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 FAM186AA6NE01 2351 aa16.65■□□□□ 0.26
CDK5RAP3-226ENST00000583182 IGKV6-21A0A0C4DH24 114 aa16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 PRR23AA6NEV1 266 aa16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 B4GALT3O60512 393 aa16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 HMGB1P09429 215 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 FGD1P98174 961 aa16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 NTRK3Q16288 839 aa16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 TWF2Q6IBS0 349 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 TMC5Q6UXY8 1006 aa16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 PLCD3Q8N3E9 789 aa16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 TMEM87AQ8NBN3 555 aa16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 BICD2Q8TD16 824 aa16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 FAM105AQ9NUU6 356 aa16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 VPS54Q9P1Q0 977 aa16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 DNAJB4Q9UDY4 337 aa16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 INPP5FQ9Y2H2 1132 aa16.64■□□□□ 0.25
CDK5RAP3-226ENST00000583182 OFD1O75665 1012 aa16.63■□□□□ 0.25
CDK5RAP3-226ENST00000583182 PSMD10O75832 226 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms