RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 UBALD2Q8IYN6 164 aa18.24■□□□□ 0.51
SREBF1-221ENST00000583080 BCL7CQ8WUZ0 217 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-221ENST00000583080 NLRP7Q8WX94 980 aa18.24■□□□□ 0.51
SREBF1-221ENST00000583080 LPPQ93052 612 aa18.24■□□□□ 0.51
SREBF1-221ENST00000583080 PHKBQ93100 1093 aa18.24■□□□□ 0.51
SREBF1-221ENST00000583080 MRPL9Q9BYD2 267 aaKnown RBP18.24■□□□□ 0.51
SREBF1-221ENST00000583080 NID2Q14112 1375 aa18.23■□□□□ 0.51
SREBF1-221ENST00000583080 MEIS3P2A8K0S8 358 aa18.23■□□□□ 0.51
SREBF1-221ENST00000583080 ZC3H11AO75152 810 aaKnown RBP eCLIP18.23■□□□□ 0.51
SREBF1-221ENST00000583080 EOMESO95936 686 aa18.23■□□□□ 0.51
SREBF1-221ENST00000583080 MTHFRP42898 656 aa18.23■□□□□ 0.51
SREBF1-221ENST00000583080 TBC1D8BQ0IIM8 1120 aa18.23■□□□□ 0.51
SREBF1-221ENST00000583080 LONRF3Q496Y0 759 aa18.23■□□□□ 0.51
SREBF1-221ENST00000583080 VPS52Q8N1B4 723 aa18.23■□□□□ 0.51
SREBF1-221ENST00000583080 TDRD5Q8NAT2 981 aaKnown RBP18.23■□□□□ 0.51
SREBF1-221ENST00000583080 CCDC12Q8WUD4 166 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-221ENST00000583080 TMEM169Q96HH4 297 aa18.23■□□□□ 0.51
SREBF1-221ENST00000583080 UNC45AQ9H3U1 944 aa18.23■□□□□ 0.51
SREBF1-221ENST00000583080 NRBP2Q9NSY0 501 aa18.23■□□□□ 0.51
SREBF1-221ENST00000583080 GAS7O60861 476 aa18.22■□□□□ 0.51
SREBF1-221ENST00000583080 CXCL14O95715 111 aa18.22■□□□□ 0.51
SREBF1-221ENST00000583080 PHKA2P46019 1235 aa18.22■□□□□ 0.51
SREBF1-221ENST00000583080 ALDH7A1P49419 539 aaKnown RBP18.22■□□□□ 0.51
SREBF1-221ENST00000583080 TARBP2Q15633 366 aaKnown RBP18.22■□□□□ 0.51
SREBF1-221ENST00000583080 MCTP2Q6DN12 878 aa18.22■□□□□ 0.51
SREBF1-221ENST00000583080 KIAA1841Q6NSI8 718 aa18.22■□□□□ 0.51
SREBF1-221ENST00000583080 ASCL5Q7RTU5 278 aa18.22■□□□□ 0.51
SREBF1-221ENST00000583080 ZNF710Q8N1W2 664 aa18.22■□□□□ 0.51
SREBF1-221ENST00000583080 SH2D3AQ9BRG2 576 aa18.22■□□□□ 0.51
SREBF1-221ENST00000583080 IRF2BPLQ9H1B7 796 aa18.22■□□□□ 0.51
SREBF1-221ENST00000583080 DACT1Q9NYF0 836 aa18.22■□□□□ 0.51
SREBF1-221ENST00000583080 SEPT9Q9UHD8 586 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-221ENST00000583080 PRPF3O43395 683 aaKnown RBP18.21■□□□□ 0.51
SREBF1-221ENST00000583080 B4GALT3O60512 393 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 GNA11P29992 359 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 NUBP1P53384 320 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 FGD1P98174 961 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 KRT32Q14532 448 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 MTERF2Q49AM1 385 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 BMP2KLQ5H9B9 411 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 Q6ZUG5 572 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 SLC5A5Q92911 643 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 BRF1Q92994 677 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 CCDC136Q96JN2 1154 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 CEP89Q96ST8 783 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 VN1R3Q9BXE9 311 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 TBC1D13Q9NVG8 400 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 DZANK1Q9NVP4 752 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 VPS54Q9P1Q0 977 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 LIMD1Q9UGP4 676 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 DBR1Q9UK59 544 aaKnown RBP18.21■□□□□ 0.51
SREBF1-221ENST00000583080 INPP5FQ9Y2H2 1132 aa18.21■□□□□ 0.51
SREBF1-221ENST00000583080 A0A087WZ62 844 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 CCDC196A0A1B0GTZ2 297 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 PROB1E7EW31 1015 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 STBD1O95210 358 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 CTSAP10619 480 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 JAK3P52333 1124 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 LRCH2Q5VUJ6 765 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 TWF2Q6IBS0 349 aaKnown RBP18.2■□□□□ 0.5
SREBF1-221ENST00000583080 TMC5Q6UXY8 1006 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 ZDHHC14Q8IZN3 488 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 SLC22A17Q8WUG5 538 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 IGSF21Q96ID5 467 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 RIT2Q99578 217 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 FDXACB1Q9BRP7 624 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-221ENST00000583080 TEKT3Q9BXF9 490 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 GCOM2Q9BZD3 368 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-221ENST00000583080 NRDE2Q9H7Z3 1164 aa18.2■□□□□ 0.5
SREBF1-221ENST00000583080 PIN4Q9Y237 131 aaKnown RBP18.2■□□□□ 0.5
SREBF1-221ENST00000583080 PTPRZ1P23471 2315 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-221ENST00000583080 PRR23AA6NEV1 266 aa18.19■□□□□ 0.5
SREBF1-221ENST00000583080 SFNP31947 248 aa18.19■□□□□ 0.5
SREBF1-221ENST00000583080 NTRK3Q16288 839 aa18.19■□□□□ 0.5
SREBF1-221ENST00000583080 CWF19L1Q69YN2 538 aaKnown RBP18.19■□□□□ 0.5
SREBF1-221ENST00000583080 ASTLQ6HA08 431 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-221ENST00000583080 DDX53Q86TM3 631 aaKnown RBP18.19■□□□□ 0.5
SREBF1-221ENST00000583080 CHST12Q9NRB3 414 aa18.19■□□□□ 0.5
SREBF1-221ENST00000583080 DNAJB4Q9UDY4 337 aa18.19■□□□□ 0.5
SREBF1-221ENST00000583080 IRAK3Q9Y616 596 aa18.19■□□□□ 0.5
SREBF1-221ENST00000583080 DMDP11532 3685 aa18.19■□□□□ 0.5
SREBF1-221ENST00000583080 IGKV6-21A0A0C4DH24 114 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 PSMD10O75832 226 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 GALTP07902 379 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 HMGB1P09429 215 aaKnown RBP18.18■□□□□ 0.5
SREBF1-221ENST00000583080 SFPQP23246 707 aaKnown RBP eCLIP18.18■□□□□ 0.5
SREBF1-221ENST00000583080 NBL1P41271 181 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 SLC11A1P49279 550 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 POLGP54098 1239 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-221ENST00000583080 BMS1Q14692 1282 aaKnown RBP18.18■□□□□ 0.5
SREBF1-221ENST00000583080 PTPN14Q15678 1187 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 NOMO2Q5JPE7 1267 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 ATAT1Q5SQI0 421 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 MIER3Q7Z3K6 550 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 KSR1Q8IVT5 923 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 CCDC148Q8NFR7 591 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 BICD2Q8TD16 824 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 JAKMIP1Q96N16 626 aaKnown RBP18.18■□□□□ 0.5
SREBF1-221ENST00000583080 TRAIPQ9BWF2 469 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 SLC26A6Q9BXS9 759 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms