RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 CDK5RAP3Q96JB5 506 aa22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 RAD9AQ99638 391 aa22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 FTHL17Q9BXU8 183 aa22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 TSPYL2Q9H2G4 693 aaPredicted RBP22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 SLC28A3Q9HAS3 691 aa22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 SRPRBQ9Y5M8 271 aaKnown RBP22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 ARID2Q68CP9 1835 aa22.98■■□□□ 1.27
PPP4R1-221ENST00000582240 NASPP49321 788 aaPredicted RBP22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 GATMP50440 423 aa22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 CAPSQ13938 189 aa22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 GRIN2CQ14957 1233 aa22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 TMEM119Q4V9L6 283 aa22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 ODR4Q5SWX8 454 aa22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 HYIQ5T013 277 aa22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 PPP2R2DQ66LE6 453 aa22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 ZNF710Q8N1W2 664 aa22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 BSNDQ8WZ55 320 aa22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 AK8Q96MA6 479 aa22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 RUSC1Q9BVN2 902 aa22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 MTMR10Q9NXD2 777 aa22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 MICAL3Q7RTP6 2002 aa22.97■■□□□ 1.27
PPP4R1-221ENST00000582240 LAMA3Q16787 3333 aa22.96■■□□□ 1.27
PPP4R1-221ENST00000582240 ASAP2O43150 1006 aa22.96■■□□□ 1.27
PPP4R1-221ENST00000582240 BRD1O95696 1058 aa22.96■■□□□ 1.27
PPP4R1-221ENST00000582240 DNM1Q05193 864 aaKnown RBP22.96■■□□□ 1.27
PPP4R1-221ENST00000582240 DHX8Q14562 1220 aaKnown RBP22.96■■□□□ 1.27
PPP4R1-221ENST00000582240 CATSPER4Q7RTX7 472 aa22.96■■□□□ 1.27
PPP4R1-221ENST00000582240 LINC00301Q8NCQ3 95 aa22.96■■□□□ 1.27
PPP4R1-221ENST00000582240 GUCD1Q96NT3 240 aa22.96■■□□□ 1.27
PPP4R1-221ENST00000582240 RGS18Q9NS28 235 aa22.96■■□□□ 1.27
PPP4R1-221ENST00000582240 GBF1Q92538 1859 aa22.96■■□□□ 1.27
PPP4R1-221ENST00000582240 PLCG1P19174 1290 aa22.95■■□□□ 1.26
PPP4R1-221ENST00000582240 TAP1Q03518 808 aa22.95■■□□□ 1.26
PPP4R1-221ENST00000582240 RAD51AP2Q09MP3 1159 aa22.95■■□□□ 1.26
PPP4R1-221ENST00000582240 MXD4Q14582 209 aaPredicted RBP22.95■■□□□ 1.26
PPP4R1-221ENST00000582240 RINT1Q6NUQ1 792 aa22.95■■□□□ 1.26
PPP4R1-221ENST00000582240 MCPH1Q8NEM0 835 aa22.95■■□□□ 1.26
PPP4R1-221ENST00000582240 RASSF8Q8NHQ8 419 aa22.95■■□□□ 1.26
PPP4R1-221ENST00000582240 SYMPKQ92797 1274 aaKnown RBP22.95■■□□□ 1.26
PPP4R1-221ENST00000582240 CALML4Q96GE6 196 aa22.95■■□□□ 1.26
PPP4R1-221ENST00000582240 YME1L1Q96TA2 773 aa22.95■■□□□ 1.26
PPP4R1-221ENST00000582240 PANK2Q9BZ23 570 aa22.95■■□□□ 1.26
PPP4R1-221ENST00000582240 NPHP3-ACAD11A0A0J9YXS1 232 aa22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 LRRIQ4A6NIV6 560 aa22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 C9IYK1 514 aa22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 RFXAPO00287 272 aa22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 SPTLC2O15270 562 aa22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 PLA2G4BP0C869 781 aa22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 PDIA4P13667 645 aaKnown RBP22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 ZSCAN20P17040 1043 aaPredicted RBP22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 PTENP60484 403 aa22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 HTRA4P83105 476 aaPredicted RBP22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 SRGAP1Q7Z6B7 1085 aa22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 KRI1Q8N9T8 703 aaKnown RBP22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 INO80BQ9C086 356 aaPredicted RBP22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 NT5C3AQ9H0P0 336 aa22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 PRDM12Q9H4Q4 367 aa22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 LRFN2Q9ULH4 789 aa22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 INSL6Q9Y581 213 aa22.94■■□□□ 1.26
PPP4R1-221ENST00000582240 SFI1A8K8P3 1242 aa22.93■■□□□ 1.26
PPP4R1-221ENST00000582240 INO80B-WBP1J3KQ70 363 aa22.93■■□□□ 1.26
PPP4R1-221ENST00000582240 SFPQP23246 707 aaKnown RBP eCLIP22.93■■□□□ 1.26
PPP4R1-221ENST00000582240 PHKA2P46019 1235 aa22.93■■□□□ 1.26
PPP4R1-221ENST00000582240 SARSP49591 514 aaKnown RBP22.93■■□□□ 1.26
PPP4R1-221ENST00000582240 TFDP1Q14186 410 aa22.93■■□□□ 1.26
PPP4R1-221ENST00000582240 C1orf186Q6ZWK4 172 aa22.93■■□□□ 1.26
PPP4R1-221ENST00000582240 MYLIPQ8WY64 445 aa22.93■■□□□ 1.26
PPP4R1-221ENST00000582240 CDX2Q99626 313 aaPredicted RBP22.93■■□□□ 1.26
PPP4R1-221ENST00000582240 BLOC1S4Q9NUP1 217 aa22.93■■□□□ 1.26
PPP4R1-221ENST00000582240 MTUS1Q9ULD2 1270 aa22.93■■□□□ 1.26
PPP4R1-221ENST00000582240 PIN4Q9Y237 131 aaKnown RBP22.93■■□□□ 1.26
PPP4R1-221ENST00000582240 LINC01553A4QN01 128 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 HIP1RO75146 1068 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 SLC12A3P55017 1021 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 CACNB1Q02641 598 aaPredicted RBP22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 MCM6Q14566 821 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 LONRF3Q496Y0 759 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 PAN2Q504Q3 1202 aaKnown RBP22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 SLC24A5Q71RS6 500 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 NPAS4Q8IUM7 802 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 CRIPAKQ8N1N5 446 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 SYT2Q8N9I0 419 aaPredicted RBP22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 RNF169Q8NCN4 708 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 CPB2Q96IY4 423 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 KIFC3Q9BVG8 833 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 CCSER1Q9C0I3 900 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 C1orf112Q9NSG2 853 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 USP20Q9Y2K6 914 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 PCDHB7Q9Y5E2 793 aa22.92■■□□□ 1.26
PPP4R1-221ENST00000582240 TMEM265A0A087WTH1 108 aa22.91■■□□□ 1.26
PPP4R1-221ENST00000582240 EPOPA6NHQ4 379 aa22.91■■□□□ 1.26
PPP4R1-221ENST00000582240 LIG1P18858 919 aa22.91■■□□□ 1.26
PPP4R1-221ENST00000582240 FAM189BP81408 668 aa22.91■■□□□ 1.26
PPP4R1-221ENST00000582240 MBTD1Q05BQ5 628 aa22.91■■□□□ 1.26
PPP4R1-221ENST00000582240 DAW1Q8N136 415 aa22.91■■□□□ 1.26
PPP4R1-221ENST00000582240 ARNTL2Q8WYA1 636 aa22.91■■□□□ 1.26
PPP4R1-221ENST00000582240 DGKIO75912 1065 aa22.9■■□□□ 1.26
PPP4R1-221ENST00000582240 YEATS4O95619 227 aa22.9■■□□□ 1.26
PPP4R1-221ENST00000582240 STAG3L1P0CL83 205 aa22.9■■□□□ 1.26
PPP4R1-221ENST00000582240 FGFR1P11362 822 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms