RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 CKAP2LQ8IYA6 745 aa5.61□□□□□ -1.51
TTC39C-207ENST00000581394 NTN5Q8WTR8 489 aaPredicted RBP5.61□□□□□ -1.51
TTC39C-207ENST00000581394 ZNF512Q96ME7 567 aaPredicted RBP5.61□□□□□ -1.51
TTC39C-207ENST00000581394 RIOX1Q9H6W3 641 aa5.61□□□□□ -1.51
TTC39C-207ENST00000581394 KCMF1Q9P0J7 381 aa5.61□□□□□ -1.51
TTC39C-207ENST00000581394 ZNHIT2Q9UHR6 403 aa5.61□□□□□ -1.51
TTC39C-207ENST00000581394 TOX4O94842 621 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 KCNA6P17658 529 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 RGS3P49796 1198 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 SLC6A3Q01959 620 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 CSRP2Q16527 193 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 KCNV1Q6PIU1 500 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 MB21D1Q8N884 522 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 C2orf69Q8N8R5 385 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 SLC7A14Q8TBB6 771 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 PGBD4Q96DM1 585 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 MAML3Q96JK9 1138 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 MAGEB10Q96LZ2 347 aaPredicted RBP5.6□□□□□ -1.51
TTC39C-207ENST00000581394 BOCQ9BWV1 1114 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 HAPLN2Q9GZV7 340 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 TOR3AQ9H497 397 aa5.6□□□□□ -1.51
TTC39C-207ENST00000581394 POLR3BQ9NW08 1133 aaPredicted RBP5.6□□□□□ -1.51
TTC39C-207ENST00000581394 COL4A3Q01955 1670 aa5.59□□□□□ -1.51
TTC39C-207ENST00000581394 ZAR1LA6NP61 321 aa5.59□□□□□ -1.51
TTC39C-207ENST00000581394 B3GALT2O43825 422 aa5.59□□□□□ -1.51
TTC39C-207ENST00000581394 C21orf58P58505 322 aa5.59□□□□□ -1.51
TTC39C-207ENST00000581394 SPIDRQ14159 915 aa5.59□□□□□ -1.51
TTC39C-207ENST00000581394 TMEM177Q53S58 311 aa5.59□□□□□ -1.51
TTC39C-207ENST00000581394 KRT40Q6A162 431 aa5.59□□□□□ -1.51
TTC39C-207ENST00000581394 SYCE2Q6PIF2 218 aa5.59□□□□□ -1.51
TTC39C-207ENST00000581394 BMP8AQ7Z5Y6 402 aa5.59□□□□□ -1.51
TTC39C-207ENST00000581394 ARL8AQ96BM9 186 aa5.59□□□□□ -1.51
TTC39C-207ENST00000581394 NAF1Q96HR8 494 aaKnown RBP5.59□□□□□ -1.51
TTC39C-207ENST00000581394 SCLYQ96I15 445 aa5.59□□□□□ -1.51
TTC39C-207ENST00000581394 WDR92Q96MX6 357 aa5.59□□□□□ -1.51
TTC39C-207ENST00000581394 BBC3Q96PG8 261 aaPredicted RBP5.59□□□□□ -1.51
TTC39C-207ENST00000581394 MASP2O00187 686 aa5.58□□□□□ -1.52
TTC39C-207ENST00000581394 STK10O94804 968 aaKnown RBP5.58□□□□□ -1.52
TTC39C-207ENST00000581394 HECTD2Q5U5R9 776 aa5.58□□□□□ -1.52
TTC39C-207ENST00000581394 SLFN12LQ6IEE8 588 aa5.58□□□□□ -1.52
TTC39C-207ENST00000581394 ABHD17CQ6PCB6 329 aa5.58□□□□□ -1.52
TTC39C-207ENST00000581394 APBB1IPQ7Z5R6 666 aaPredicted RBP5.58□□□□□ -1.52
TTC39C-207ENST00000581394 CMTM4Q8IZR5 234 aa5.58□□□□□ -1.52
TTC39C-207ENST00000581394 ST8SIA2Q92186 375 aa5.58□□□□□ -1.52
TTC39C-207ENST00000581394 DYDC2Q96IM9 177 aa5.58□□□□□ -1.52
TTC39C-207ENST00000581394 KDM2BQ8NHM5 1336 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 TCRBV16S1A1N1A0A5B0 115 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 TRIM24O15164 1050 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 MTSS1O43312 755 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 TAP1Q03518 808 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 ARHGAP44Q17R89 818 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 PLEKHG4Q58EX7 1191 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 COLEC12Q5KU26 742 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 NBPF6Q5VWK0 638 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 ADGRG3Q86Y34 549 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 IGSF22Q8N9C0 903 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 NBPF4Q96M43 638 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 C14orf93Q9H972 538 aaKnown RBP5.57□□□□□ -1.52
TTC39C-207ENST00000581394 SYNPO2LQ9H987 977 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 SORCS3Q9UPU3 1222 aa5.57□□□□□ -1.52
TTC39C-207ENST00000581394 UBA6A0AVT1 1052 aaPredicted RBP5.56□□□□□ -1.52
TTC39C-207ENST00000581394 DAPK3O43293 454 aa5.56□□□□□ -1.52
TTC39C-207ENST00000581394 KCNQ2O43526 872 aa5.56□□□□□ -1.52
TTC39C-207ENST00000581394 GNAT2P19087 354 aa5.56□□□□□ -1.52
TTC39C-207ENST00000581394 ZFP36P26651 326 aaKnown RBP5.56□□□□□ -1.52
TTC39C-207ENST00000581394 KIR2DL3P43628 341 aa5.56□□□□□ -1.52
TTC39C-207ENST00000581394 MECP2P51608 486 aaKnown RBP5.56□□□□□ -1.52
TTC39C-207ENST00000581394 NPEPPSP55786 919 aa5.56□□□□□ -1.52
TTC39C-207ENST00000581394 TTC38Q5R3I4 469 aa5.56□□□□□ -1.52
TTC39C-207ENST00000581394 STRIP1Q5VSL9 837 aa5.56□□□□□ -1.52
TTC39C-207ENST00000581394 OLFML1Q6UWY5 402 aa5.56□□□□□ -1.52
TTC39C-207ENST00000581394 CXorf67Q86X51 503 aaPredicted RBP5.56□□□□□ -1.52
TTC39C-207ENST00000581394 CPT1CQ8TCG5 803 aa5.56□□□□□ -1.52
TTC39C-207ENST00000581394 SFMBT1Q9UHJ3 866 aa5.56□□□□□ -1.52
TTC39C-207ENST00000581394 DVL2O14641 736 aa5.55□□□□□ -1.52
TTC39C-207ENST00000581394 RECQL4O94761 1208 aa5.55□□□□□ -1.52
TTC39C-207ENST00000581394 KIF11P52732 1056 aa5.55□□□□□ -1.52
TTC39C-207ENST00000581394 BCAR1P56945 870 aa5.55□□□□□ -1.52
TTC39C-207ENST00000581394 TIGD2Q4W5G0 525 aa5.55□□□□□ -1.52
TTC39C-207ENST00000581394 METTL24Q5JXM2 366 aa5.55□□□□□ -1.52
TTC39C-207ENST00000581394 ZKSCAN2Q63HK3 967 aa5.55□□□□□ -1.52
TTC39C-207ENST00000581394 BRAPQ7Z569 592 aa5.55□□□□□ -1.52
TTC39C-207ENST00000581394 C16orf92Q96LL3 132 aa5.55□□□□□ -1.52
TTC39C-207ENST00000581394 ACSS2Q9NR19 701 aa5.55□□□□□ -1.52
TTC39C-207ENST00000581394 ADARB2Q9NS39 739 aaKnown RBP5.55□□□□□ -1.52
TTC39C-207ENST00000581394 SIRPGQ9P1W8 387 aa5.55□□□□□ -1.52
TTC39C-207ENST00000581394 DNAI1Q9UI46 699 aa5.55□□□□□ -1.52
TTC39C-207ENST00000581394 CCDC85CA6NKD9 419 aa5.54□□□□□ -1.52
TTC39C-207ENST00000581394 HNRNPLP14866 589 aaKnown RBP eCLIP5.54□□□□□ -1.52
TTC39C-207ENST00000581394 CD38P28907 300 aa5.54□□□□□ -1.52
TTC39C-207ENST00000581394 KRTAP10-11P60412 298 aa5.54□□□□□ -1.52
TTC39C-207ENST00000581394 BEND2Q8NDZ0 799 aa5.54□□□□□ -1.52
TTC39C-207ENST00000581394 RPGRQ92834 1020 aaKnown RBP5.54□□□□□ -1.52
TTC39C-207ENST00000581394 MYEOVQ96EZ4 313 aa5.54□□□□□ -1.52
TTC39C-207ENST00000581394 PDCD2LQ9BRP1 358 aa5.54□□□□□ -1.52
TTC39C-207ENST00000581394 MRPL4Q9BYD3 311 aaKnown RBP5.54□□□□□ -1.52
TTC39C-207ENST00000581394 NCDNQ9UBB6 729 aa5.54□□□□□ -1.52
TTC39C-207ENST00000581394 A0A0A6YYK5 440 aaPredicted RBP5.53□□□□□ -1.52
TTC39C-207ENST00000581394 CCDC163A0A0D9SF12 145 aa5.53□□□□□ -1.52
TTC39C-207ENST00000581394 STC2O76061 302 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms