RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 KCTD10Q9H3F6 313 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 HMX1Q9NP08 348 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SAMSN1Q9NSI8 373 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 KCNG1Q9UIX4 513 aa15.25■□□□□ 0.03
CDK5RAP3-219ENST00000580670 HAS3O00219 553 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PPP1R37O75864 691 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 GLRA2P23416 452 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 LRRC63Q05C16 580 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 KCNA1Q09470 495 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PPP2R5AQ15172 486 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 EFCAB12Q6NXP0 572 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 CSGALNACT2Q8N6G5 542 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SH3TC2Q8TF17 1288 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 NTPCRQ9BSD7 190 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 MTG1Q9BT17 334 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 KIFC3Q9BVG8 833 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 STRA6Q9BX79 667 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PDCL3Q9H2J4 239 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ST6GALNAC4Q9H4F1 302 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 KAT6AQ92794 2004 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 RRN3P2A6NIE6 340 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 AP5Z1O43299 807 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 MSCO60682 206 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ATP1A3P13637 1013 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 MSNP26038 577 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 DNM2P50570 870 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 CLCN3P51790 818 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 MKRN4PQ13434 485 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ZCWPW2Q504Y3 356 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 MTHFD1LQ6UB35 978 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 TMEM161BQ8NDZ6 487 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PPP1R13LQ8WUF5 828 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PRPF31Q8WWY3 499 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PSPC1Q8WXF1 523 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SRRTQ9BXP5 876 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SETD4Q9NVD3 440 aa15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SUCLA2Q9P2R7 463 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-219ENST00000580670 HTTP42858 3142 aa15.23■□□□□ 0.03
CDK5RAP3-219ENST00000580670 LRRIQ4A6NIV6 560 aa15.23■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ZNF18P17022 549 aa15.23■□□□□ 0.03
CDK5RAP3-219ENST00000580670 CDK11BP21127 795 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-219ENST00000580670 CST5P28325 142 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-219ENST00000580670 NAMPTP43490 491 aa15.23■□□□□ 0.03
CDK5RAP3-219ENST00000580670 GTF2BQ00403 316 aa15.23■□□□□ 0.03
CDK5RAP3-219ENST00000580670 FOXR2Q6PJQ5 311 aa15.23■□□□□ 0.03
CDK5RAP3-219ENST00000580670 CXCL17Q6UXB2 119 aa15.23■□□□□ 0.03
CDK5RAP3-219ENST00000580670 KLHDC9Q8NEP7 349 aa15.23■□□□□ 0.03
CDK5RAP3-219ENST00000580670 DEPTORQ8TB45 409 aa15.23■□□□□ 0.03
CDK5RAP3-219ENST00000580670 NOC3LQ8WTT2 800 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-219ENST00000580670 NRCAMQ92823 1304 aa15.23■□□□□ 0.03
CDK5RAP3-219ENST00000580670 DENND3A2RUS2 1198 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 H0YCG3 227 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PDXKO00764 312 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 LAMTOR4Q0VGL1 99 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 MXD4Q14582 209 aaPredicted RBP15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 KCNA10Q16322 511 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 MARCH8Q5T0T0 291 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 CDKAL1Q5VV42 579 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PPP4R3CPQ6ZMV5 832 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 RNF180Q86T96 592 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SYCP3Q8IZU3 236 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 LMBR1Q8WVP7 490 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ACCSQ96QU6 501 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 THAP9Q9H5L6 903 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 TYW1Q9NV66 732 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ADGRA3Q8IWK6 1321 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ZMYM2Q9UBW7 1377 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 EVPLQ92817 2033 aa15.22■□□□□ 0.03
CDK5RAP3-219ENST00000580670 CALUO43852 315 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 TMOD1P28289 359 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 CAPSQ13938 189 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SLC9C1Q4G0N8 1177 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 CCSAPQ6IQ19 270 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 NFRKBQ6P4R8 1299 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 SARM1Q6SZW1 724 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 RHPN2Q8IUC4 686 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 LINC01465Q8N7H1 131 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 C7orf31Q8N865 590 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 PCSK9Q8NBP7 692 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 HVCN1Q96D96 273 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 EEF2KMTQ96G04 330 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 TRIM5Q9C035 493 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 GBP3Q9H0R5 595 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 TMEM206Q9H813 350 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 ARHGAP28Q9P2N2 729 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 TBX20Q9UMR3 447 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 TRAF3IP3Q9Y228 551 aa15.21■□□□□ 0.03
CDK5RAP3-219ENST00000580670 TGFB1I1O43294 461 aa15.21■□□□□ 0.02
CDK5RAP3-219ENST00000580670 ADCY5O95622 1261 aa15.21■□□□□ 0.02
CDK5RAP3-219ENST00000580670 FGFR1OPO95684 399 aaKnown RBP15.21■□□□□ 0.02
CDK5RAP3-219ENST00000580670 ASGR1P07306 291 aa15.21■□□□□ 0.02
CDK5RAP3-219ENST00000580670 GJB1P08034 283 aa15.21■□□□□ 0.02
CDK5RAP3-219ENST00000580670 SRGAP2CP0DJJ0 459 aa15.21■□□□□ 0.02
CDK5RAP3-219ENST00000580670 HSPA8P11142 646 aaKnown RBP15.21■□□□□ 0.02
CDK5RAP3-219ENST00000580670 FANCCQ00597 558 aa15.21■□□□□ 0.02
CDK5RAP3-219ENST00000580670 FKBP3Q00688 224 aaKnown RBP15.21■□□□□ 0.02
CDK5RAP3-219ENST00000580670 EDRF1Q3B7T1 1238 aa15.21■□□□□ 0.02
CDK5RAP3-219ENST00000580670 LHX8Q68G74 356 aa15.21■□□□□ 0.02
CDK5RAP3-219ENST00000580670 HS2ST1Q7LGA3 356 aa15.21■□□□□ 0.02
CDK5RAP3-219ENST00000580670 CREBRFQ8IUR6 639 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms