RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SOX10P56693 466 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 NCBP1Q09161 790 aaKnown RBP15.78■□□□□ 0.12
SKA2-205ENST00000580541 ALCAMQ13740 583 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 KCNB1Q14721 858 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 PCBP1Q15365 356 aaKnown RBP eCLIP15.78■□□□□ 0.121e-6■■■■□ 22.1
SKA2-205ENST00000580541 CAMK4Q16566 473 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 ZBTB8OSQ8IWT0 167 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 FAM178BQ8IXR5 827 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 GRAMD1CQ8IYS0 662 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 DEPTORQ8TB45 409 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 PPP1R13LQ8WUF5 828 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 NLRP7Q8WX94 980 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 GCOM2Q9BZD3 368 aaPredicted RBP15.78■□□□□ 0.12
SKA2-205ENST00000580541 KMT5AQ9NQR1 393 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 TMEM39AQ9NV64 488 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 KIAA1468Q9P260 1216 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 PCDHB13Q9Y5F0 798 aa15.78■□□□□ 0.12
SKA2-205ENST00000580541 FRMD3A2A2Y4 597 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 SFI1A8K8P3 1242 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 PITPNM1O00562 1244 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 CLTBP09497 229 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 SRGAP2CP0DJJ0 459 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 CRYBB1P53674 252 aaPredicted RBP15.77■□□□□ 0.12
SKA2-205ENST00000580541 PEX3P56589 373 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 NLRP11P59045 1033 aaKnown RBP15.77■□□□□ 0.12
SKA2-205ENST00000580541 MRPS6P82932 125 aaKnown RBP15.77■□□□□ 0.12
SKA2-205ENST00000580541 MKRN4PQ13434 485 aaPredicted RBP15.77■□□□□ 0.12
SKA2-205ENST00000580541 PNOCQ13519 176 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 HIC1Q14526 733 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 LRRC26Q2I0M4 334 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 RUFY4Q6ZNE9 571 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 SRGAP1Q7Z6B7 1085 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 TRIML1Q8N9V2 468 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 USP38Q8NB14 1042 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 RNF149Q8NC42 400 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 ANP32EQ9BTT0 268 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 NFKBIZQ9BYH8 718 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 CELF4Q9BZC1 486 aaKnown RBP15.77■□□□□ 0.12
SKA2-205ENST00000580541 MRPL44Q9H9J2 332 aaKnown RBP15.77■□□□□ 0.12
SKA2-205ENST00000580541 GPRC5CQ9NQ84 441 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 OLFML3Q9NRN5 406 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 PCDHA5Q9Y5H7 936 aa15.77■□□□□ 0.12
SKA2-205ENST00000580541 LRRIQ4A6NIV6 560 aa15.76■□□□□ 0.11
SKA2-205ENST00000580541 VTNP04004 478 aa15.76■□□□□ 0.11
SKA2-205ENST00000580541 GLRA2P23416 452 aa15.76■□□□□ 0.11
SKA2-205ENST00000580541 PPP1R2P41236 205 aa15.76■□□□□ 0.11
SKA2-205ENST00000580541 GPC3P51654 580 aa15.76■□□□□ 0.11
SKA2-205ENST00000580541 RBL2Q08999 1139 aa15.76■□□□□ 0.11
SKA2-205ENST00000580541 FAAP100Q0VG06 881 aa15.76■□□□□ 0.11
SKA2-205ENST00000580541 NT5DC1Q5TFE4 455 aa15.76■□□□□ 0.11
SKA2-205ENST00000580541 CAVIN1Q6NZI2 390 aaKnown RBP15.76■□□□□ 0.11
SKA2-205ENST00000580541 SPATA20Q8TB22 786 aa15.76■□□□□ 0.11
SKA2-205ENST00000580541 NLRP4Q96MN2 994 aa15.76■□□□□ 0.11
SKA2-205ENST00000580541 TRPV2Q9Y5S1 764 aa15.76■□□□□ 0.11
SKA2-205ENST00000580541 SQORQ9Y6N5 450 aa15.76■□□□□ 0.11
SKA2-205ENST00000580541 RSPH10B2B2RC85 870 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 K7ERI5 159 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 RHOBTB3O94955 611 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 RSPH10BP0C881 870 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 CKBP12277 381 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 SELPP16109 830 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 NPTX2P47972 431 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 SARSP49591 514 aaKnown RBP15.75■□□□□ 0.11
SKA2-205ENST00000580541 STRN3Q13033 797 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 COASYQ13057 564 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 MAPK7Q13164 816 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 DRP2Q13474 957 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 STIM1Q13586 685 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 KMT5BQ4FZB7 885 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 FAM26DQ5JW98 314 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 FAM26FQ5R3K3 315 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 DAW1Q8N136 415 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 ZBTB10Q96DT7 871 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 HIPK3Q9H422 1215 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 ST6GALNAC4Q9H4F1 302 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 TMEM134Q9H6X4 195 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 EXOC7Q9UPT5 735 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 GINS2Q9Y248 185 aa15.75■□□□□ 0.11
SKA2-205ENST00000580541 EVI5O60447 810 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 GPR32O75388 356 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 EIF4BP23588 611 aaKnown RBP15.74■□□□□ 0.11
SKA2-205ENST00000580541 PTENP60484 403 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 CAPSQ13938 189 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 MAPK6Q16659 721 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 KIZQ2M2Z5 673 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 SASS6Q6UVJ0 657 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 ZNF720Q7Z2F6 126 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 HAUS6Q7Z4H7 955 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 SFR1Q86XK3 245 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 IFNLR1Q8IU57 520 aaPredicted RBP15.74■□□□□ 0.11
SKA2-205ENST00000580541 ASAP3Q8TDY4 903 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 DPF3Q92784 378 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 KCNN1Q92952 543 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 HVCN1Q96D96 273 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 CTAGE1Q96RT6 745 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 ADAMTS10Q9H324 1103 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 POLD4Q9HCU8 107 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 CDY2AQ9Y6F7 541 aa15.74■□□□□ 0.11
SKA2-205ENST00000580541 BRCA2P51587 3418 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms