RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	LAIR1	Q6GTX8	287 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	DCLRE1A	Q6PJP8	1040 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	TSHZ1	Q6ZSZ6	1077 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	RASGRP2	Q7LDG7	609 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	MAML2	Q8IZL2	1156 aa	Predicted RBP	7	□□□□□ -1.29
KPNB1-209	ENST00000580158	COLGALT1	Q8NBJ5	622 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	PJA1	Q8NG27	643 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	NXPE3	Q969Y0	559 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	DNAJC2	Q99543	621 aa	Known RBP	7	□□□□□ -1.29
KPNB1-209	ENST00000580158	C16orf70	Q9BSU1	422 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	MLXIP	Q9HAP2	919 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	SETD4	Q9NVD3	440 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	STX8	Q9UNK0	236 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	MTMR7	Q9Y216	660 aa		7	□□□□□ -1.29
KPNB1-209	ENST00000580158	MYH15	Q9Y2K3	1946 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	TBKBP1	A7MCY6	615 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	LILRB5	O75023	590 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	EIF3J	O75822	258 aa	Known RBP	6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	RET	P07949	1114 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	SCG2	P13521	617 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	LAG3	P18627	525 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	IBSP	P21815	317 aa	Predicted RBP	6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	ADD2	P35612	726 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	MAGEA9	P43362	315 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	RBM25	P49756	843 aa	Known RBP	6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	MCCD1	P59942	119 aa	Predicted RBP	6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	ARHGAP4	P98171	946 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	POU4F2	Q12837	409 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	PTPN14	Q15678	1187 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	HSDL1	Q3SXM5	330 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	SYDE2	Q5VT97	1194 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	ARHGEF16	Q5VV41	709 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	TAF2	Q6P1X5	1199 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	PRR23C	Q6ZRP0	262 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	PRR23B	Q6ZRT6	265 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	AACS	Q86V21	672 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	C12orf76	Q8N812	135 aa	Predicted RBP	6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	GPR152	Q8TDT2	470 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	CLEC4D	Q8WXI8	215 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	GTPBP3	Q969Y2	492 aa	Known RBP	6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	PCMTD1	Q96MG8	357 aa	Predicted RBP	6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	USP26	Q9BXU7	913 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	FAM126A	Q9BYI3	521 aa	Predicted RBP	6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	MAF1	Q9H063	256 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	ARHGEF3	Q9NR81	526 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	SEMA4G	Q9NTN9	838 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	FLNB	O75369	2602 aa	Known RBP	6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	DOCK8	Q8NF50	2099 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	CNTNAP5	Q8WYK1	1306 aa		6.99	□□□□□ -1.29
KPNB1-209	ENST00000580158	ZFYVE26	Q68DK2	2539 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	NOP56	O00567	594 aa	Known RBP	6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	CLASP2	O75122	1294 aa	Known RBP	6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	PRDM1	O75626	825 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	GGPS1	O95749	300 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	RPLP2	P05387	115 aa	Known RBP	6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	SLC3A2	P08195	630 aa	Known RBP	6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	CD52	P31358	61 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	GBP2	P32456	591 aa	Predicted RBP	6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	PPM1A	P35813	382 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	SLC16A2	P36021	539 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	GATM	P50440	423 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	NRL	P54845	237 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	TFAP4	Q01664	338 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	CSRP2	Q16527	193 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	FBXO47	Q5MNV8	452 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	CELF3	Q5SZQ8	465 aa	Known RBP	6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	ZSCAN25	Q6NSZ9	544 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	GIMAP6	Q6P9H5	292 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	TMC5	Q6UXY8	1006 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	RTN4RL1	Q86UN2	441 aa	Predicted RBP	6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	CABP7	Q86V35	215 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	SLC44A3	Q8N4M1	653 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	CELF5	Q8N6W0	485 aa	Known RBP	6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	MRPL43	Q8N983	215 aa	Known RBP	6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	RGS22	Q8NE09	1264 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	DCAF4	Q8WV16	495 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	ZNF592	Q92610	1267 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	STAM	Q92783	540 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	GLG1	Q92896	1179 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	RMDN3	Q96TC7	470 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	MYL10	Q9BUA6	226 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	TYW1	Q9NV66	732 aa	Known RBP	6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	ZNF215	Q9UL58	517 aa	Predicted RBP	6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	SQOR	Q9Y6N5	450 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	CCDC171	Q6TFL3	1326 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	NRCAM	Q92823	1304 aa		6.98	□□□□□ -1.29
KPNB1-209	ENST00000580158	KANSL1L	A0AUZ9	987 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	C2orf71	A6NGG8	1288 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158		M0QZ92	97 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	MSTN	O14793	375 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	NCAM2	O15394	837 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	SORBS3	O60504	671 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	BCAR3	O75815	825 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	CXCL14	O95715	111 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	LGALS2	P05162	132 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	TGFB3	P10600	412 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	GLUL	P15104	373 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	SARS	P49591	514 aa	Known RBP	6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	STARD6	P59095	220 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	ATP8B2	P98198	1209 aa		6.97	□□□□□ -1.29

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