RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 SERTAD1Q9UHV2 236 aa17.23■□□□□ 0.35
SLC6A4-205ENST00000579221 MYMKA6NI61 221 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 GPR182O15218 404 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 RPS6KA5O75582 802 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 ZNF202O95125 648 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 DARSP14868 501 aaKnown RBP17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 NAMPTP43490 491 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 PHKA2P46019 1235 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 UBE2HP62256 183 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 LPIN1Q14693 890 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 LONRF3Q496Y0 759 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 FAM43BQ6ZT52 329 aaPredicted RBP17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 DYMQ7RTS9 669 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 DDX12PQ92771 950 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 CCDC34Q96HJ3 373 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 GDF15Q99988 308 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 PCDH10Q9P2E7 1040 aa17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 LARSQ9P2J5 1176 aaKnown RBP17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 NOC2LQ9Y3T9 749 aaKnown RBP17.22■□□□□ 0.35
SLC6A4-205ENST00000579221 TCHHQ07283 1943 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 LRRIQ4A6NIV6 560 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 SFI1A8K8P3 1242 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 GOLGA6L22H0YM25 854 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 GADD45BO75293 160 aaPredicted RBP17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 FAM13AO94988 1023 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 ACRP10323 421 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 ACTN1P12814 892 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 PLS3P13797 630 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 PEX3P56589 373 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 PTENP60484 403 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 NFX1Q12986 1120 aaKnown RBP17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 MAPK7Q13164 816 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 PAK2Q13177 524 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 CAPSQ13938 189 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 PLEKHG4Q58EX7 1191 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 CNKSR3Q6P9H4 555 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 PSRC1Q6PGN9 363 aaPredicted RBP17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 DAW1Q8N136 415 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 CNNM3Q8NE01 707 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 DEPTORQ8TB45 409 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 TMEM40Q8WWA1 233 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 STAMQ92783 540 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 APBB2Q92870 758 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 REEP2Q9BRK0 252 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 NFKBIZQ9BYH8 718 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 IFIH1Q9BYX4 1025 aaKnown RBP17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 OSBPL7Q9BZF2 842 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 UBE2OQ9C0C9 1292 aaKnown RBP17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 C2orf40Q9H1Z8 148 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 IFT122Q9HBG6 1241 aa17.21■□□□□ 0.35
SLC6A4-205ENST00000579221 CCDC169A6NNP5 214 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 ACTN4O43707 911 aaKnown RBP17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 TBCAO75347 108 aaKnown RBP17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 CD52P31358 61 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 BMP8BP34820 402 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 AFMP43652 599 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 SMTNP53814 917 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 CACNB1Q02641 598 aaPredicted RBP17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 FAM160A1Q05DH4 1040 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 DMP1Q13316 513 aaPredicted RBP17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 IKBKEQ14164 716 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 KANK3Q6NY19 840 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 ZNF365Q70YC5 407 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 C16orf59Q7L2K0 433 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 IFNLR1Q8IU57 520 aaPredicted RBP17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 ZBTB8OSQ8IWT0 167 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 FMR1NBQ8N0W7 255 aaPredicted RBP17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 MYCT1Q8N699 235 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 DBF4BQ8NFT6 615 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 BSNDQ8WZ55 320 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 PAGE5Q96GU1 130 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 C7orf25Q9BPX7 421 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 ZHX3Q9H4I2 956 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 AGO3Q9H9G7 860 aaKnown RBP17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 PARVGQ9HBI0 331 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 KMT5AQ9NQR1 393 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 PADI3Q9ULW8 664 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 ST3GAL5Q9UNP4 418 aa17.2■□□□□ 0.34
SLC6A4-205ENST00000579221 SFPQP23246 707 aaKnown RBP eCLIP17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 NPTX2P47972 431 aa17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 EPHB4P54760 987 aa17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 PCBP1Q15365 356 aaKnown RBP eCLIP17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 TMEM240Q5SV17 173 aa17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 KRBA2Q6ZNG9 492 aa17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 FAM228AQ86W67 206 aa17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 ENGASEQ8NFI3 743 aa17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 SPIRE2Q8WWL2 714 aa17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 DNAJC19Q96DA6 116 aa17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 VWCEQ96DN2 955 aa17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 NTPCRQ9BSD7 190 aaKnown RBP17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 FTHL17Q9BXU8 183 aa17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 MTIF3Q9H2K0 278 aaKnown RBP17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 ERVK-5Q9HDB9 667 aa17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 EVPLQ92817 2033 aa17.19■□□□□ 0.34
SLC6A4-205ENST00000579221 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 ABHD14A-ACY1A0A1B0GW23 586 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 H0YCG3 227 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 INO80B-WBP1J3KQ70 363 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 EFCAB14O75071 495 aa17.18■□□□□ 0.34
SLC6A4-205ENST00000579221 CSDE1O75534 798 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms