RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 CEBPZQ03701 1054 aaKnown RBP7.28□□□□□ -1.24
TRAF4-213ENST00000578917 GPM6BQ13491 265 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 ADGRE1Q14246 886 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 PTPROQ16827 1216 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 LONRF3Q496Y0 759 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 EPC2Q52LR7 807 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 PADI6Q6TGC4 694 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 EP400NLQ6ZTU2 488 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 SRGAP1Q7Z6B7 1085 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 LINC01465Q8N7H1 131 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 C4orf32Q8N8J7 132 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 MCPH1Q8NEM0 835 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 MICAL1Q8TDZ2 1067 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 IFT74Q96LB3 600 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 PLIN2Q99541 437 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 C11orf84Q9BUA3 381 aaPredicted RBP7.28□□□□□ -1.24
TRAF4-213ENST00000578917 POLR3FQ9H1D9 316 aaPredicted RBP7.28□□□□□ -1.24
TRAF4-213ENST00000578917 DHX33Q9H6R0 707 aaKnown RBP7.28□□□□□ -1.24
TRAF4-213ENST00000578917 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.28□□□□□ -1.24
TRAF4-213ENST00000578917 AAASQ9NRG9 546 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 DDX19AQ9NUU7 478 aaKnown RBP7.28□□□□□ -1.24
TRAF4-213ENST00000578917 TMEM161AQ9NX61 479 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 DBR1Q9UK59 544 aaKnown RBP7.28□□□□□ -1.24
TRAF4-213ENST00000578917 PIN4Q9Y237 131 aaKnown RBP7.28□□□□□ -1.24
TRAF4-213ENST00000578917 RWDD3Q9Y3V2 267 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 PCDHB12Q9Y5F1 795 aa7.28□□□□□ -1.24
TRAF4-213ENST00000578917 ADGRA3Q8IWK6 1321 aa7.27□□□□□ -1.24
TRAF4-213ENST00000578917 CHD7Q9P2D1 2997 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 A0A0U1RQF3 1178 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 PP2D1A8MPX8 630 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 C9IYK1 514 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 STX6O43752 255 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 MGEA5O60502 916 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 ARHGEF15O94989 841 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 CSPG5O95196 566 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 EOMESO95936 686 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 FGFR1P11362 822 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 CYP11B2P19099 503 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 MUTP22033 750 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 FAM189BP81408 668 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 RNASELQ05823 741 aaKnown RBP7.27□□□□□ -1.25
TRAF4-213ENST00000578917 GRB10Q13322 594 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 FOXD4L5Q5VV16 416 aaPredicted RBP7.27□□□□□ -1.25
TRAF4-213ENST00000578917 ARL6IP4Q66PJ3 421 aaKnown RBP7.27□□□□□ -1.25
TRAF4-213ENST00000578917 GLB1LQ6UWU2 654 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 SPRED2Q7Z698 418 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 ECHDC2Q86YB7 292 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 ZBTB8OSQ8IWT0 167 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 CMTR2Q8IYT2 770 aaKnown RBP7.27□□□□□ -1.25
TRAF4-213ENST00000578917 IGSF22Q8N9C0 903 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 DEPTORQ8TB45 409 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 SP7Q8TDD2 431 aaPredicted RBP7.27□□□□□ -1.25
TRAF4-213ENST00000578917 GDPD5Q8WTR4 605 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 LINC01599Q8WXQ3 324 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 FOXD4L4Q8WXT5 416 aaPredicted RBP7.27□□□□□ -1.25
TRAF4-213ENST00000578917 SNX21Q969T3 373 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 PGBD4Q96DM1 585 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 CALML4Q96GE6 196 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 CEP89Q96ST8 783 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 TRIM6Q9C030 488 aaPredicted RBP7.27□□□□□ -1.25
TRAF4-213ENST00000578917 BHMT2Q9H2M3 363 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 MTCH2Q9Y6C9 303 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 COL6A3P12111 3177 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 TRANK1O15050 2925 aa7.27□□□□□ -1.25
TRAF4-213ENST00000578917 TRIP12Q14669 1992 aaPredicted RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 DOCK5Q9H7D0 1870 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 EPOPA6NHQ4 379 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 CCDC169A6NNP5 214 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 E9PMD0 336 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 H3BNC9 293 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 KRT18P05783 430 aaKnown RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 RB1P06400 928 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 PDIA4P13667 645 aaKnown RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 ARL2P36404 184 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 ALDH7A1P49419 539 aaKnown RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 GATMP50440 423 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 RAB27AP51159 221 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 PTENP60484 403 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 ATP2C1P98194 919 aaPredicted RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 KRT17Q04695 432 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 DHX8Q14562 1220 aaKnown RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 DSC3Q14574 896 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 PPP2R5AQ15172 486 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 PCBP1Q15365 356 aaKnown RBP eCLIP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 SF3A1Q15459 793 aaKnown RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 IL17AQ16552 155 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 CABP7Q86V35 215 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 THNSL1Q8IYQ7 743 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 HACE1Q8IYU2 909 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 TMEM87AQ8NBN3 555 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 ASAP3Q8TDY4 903 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 KIFAP3Q92845 792 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 ZNF689Q96CS4 500 aaPredicted RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 TMEM117Q9H0C3 514 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 NT5C3AQ9H0P0 336 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 ZSCAN16Q9H4T2 348 aaPredicted RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 ELAC1Q9H777 363 aaKnown RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 IFT122Q9HBG6 1241 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 POLD4Q9HCU8 107 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms