RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 RGS20O76081 388 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 LCA5LO95447 670 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 FERP16591 822 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 GARTP22102 1010 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 EIF4A3P38919 411 aaKnown RBP12.14□□□□□ -0.47
SKA2-204ENST00000578519 KIF11P52732 1056 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 NPEPPSP55786 919 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 CNTN2Q02246 1040 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 BFSP1Q12934 665 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 RAPGEF1Q13905 1077 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 BRDTQ58F21 947 aaPredicted RBP12.14□□□□□ -0.47
SKA2-204ENST00000578519 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 KLHDC7AQ5VTJ3 777 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 SLFN12LQ6IEE8 588 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 METTL7BQ6UX53 244 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 ANO5Q75V66 913 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 RNF10Q8N5U6 811 aaKnown RBP12.14□□□□□ -0.47
SKA2-204ENST00000578519 BAP1Q92560 729 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 UBXN4Q92575 508 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 KCNN1Q92952 543 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 SLC35C1Q96A29 364 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 PURBQ96QR8 312 aaKnown RBP12.14□□□□□ -0.47
SKA2-204ENST00000578519 NIFKQ9BYG3 293 aaKnown RBP12.14□□□□□ -0.47
SKA2-204ENST00000578519 IFIH1Q9BYX4 1025 aaKnown RBP12.14□□□□□ -0.47
SKA2-204ENST00000578519 NLRC4Q9NPP4 1024 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 SLC5A4Q9NY91 659 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 TBX20Q9UMR3 447 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 GUCA1BQ9UMX6 200 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 MAFBQ9Y5Q3 323 aaPredicted RBP12.14□□□□□ -0.47
SKA2-204ENST00000578519 IVNS1ABPQ9Y6Y0 642 aa12.14□□□□□ -0.47
SKA2-204ENST00000578519 SOWAHBA6NEL2 793 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 EFCAB8A8MWE9 144 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 NOP56O00567 594 aaKnown RBP12.13□□□□□ -0.47
SKA2-204ENST00000578519 SLC16A4O15374 487 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 LDHAP00338 332 aaKnown RBP12.13□□□□□ -0.47
SKA2-204ENST00000578519 TUBBP07437 444 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 UCHL3P15374 230 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 PON1P27169 355 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 GTF2H1P32780 548 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 NPTX2P47972 431 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 FMO5P49326 533 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 STAT5BP51692 787 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 VAMP7P51809 220 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 ERVK-9P63128 1117 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 SP4Q02446 784 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 TTLL4Q14679 1199 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 UGCGQ16739 394 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 WHAMMP3Q1A5X7 153 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 IQCEQ6IPM2 695 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 ANKRD23Q86SG2 305 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 MAP4K3Q8IVH8 894 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 ABRAQ8N0Z2 381 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 TRIM58Q8NG06 486 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 AFAP1L1Q8TED9 768 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 SECISBP2LQ93073 1101 aaKnown RBP12.13□□□□□ -0.47
SKA2-204ENST00000578519 BORCS6Q96GS4 357 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 CRACR2AQ9BSW2 395 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 GANQ9H2C0 597 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 GBA2Q9HCG7 927 aaPredicted RBP12.13□□□□□ -0.47
SKA2-204ENST00000578519 ARGLU1Q9NWB6 273 aaPredicted RBP12.13□□□□□ -0.47
SKA2-204ENST00000578519 GCNT4Q9P109 453 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 RBPJLQ9UBG7 517 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 PCDHA13Q9Y5I0 950 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 ZMYM2Q9UBW7 1377 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 SCN4AP35499 1836 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 SMCHD1A6NHR9 2005 aa12.13□□□□□ -0.47
SKA2-204ENST00000578519 PARP14Q460N5 1801 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 IGKV6D-21A0A0A0MT36 114 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 ANO9A1A5B4 782 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 DENND3A2RUS2 1198 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 CNMDO75829 334 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 NAMPTP43490 491 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 CASP4P49662 377 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 MYL7Q01449 175 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 CKAP4Q07065 602 aaKnown RBP12.12□□□□□ -0.47
SKA2-204ENST00000578519 MTERF2Q49AM1 385 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 PLA2G4FQ68DD2 849 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 GPAT2Q6NUI2 795 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 PLPPR4Q7Z2D5 763 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 CCDC60Q8IWA6 550 aaPredicted RBP12.12□□□□□ -0.47
SKA2-204ENST00000578519 DHX37Q8IY37 1157 aaKnown RBP12.12□□□□□ -0.47
SKA2-204ENST00000578519 SLC35F6Q8N357 371 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 TMEM161BQ8NDZ6 487 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 DEPTORQ8TB45 409 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 TMC2Q8TDI7 906 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 MORC4Q8TE76 937 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 UBE2Q2Q8WVN8 375 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 BBXQ8WY36 941 aaPredicted RBP12.12□□□□□ -0.47
SKA2-204ENST00000578519 BICD1Q96G01 975 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 CALR3Q96L12 384 aaKnown RBP12.12□□□□□ -0.47
SKA2-204ENST00000578519 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.12□□□□□ -0.47
SKA2-204ENST00000578519 STK33Q9BYT3 514 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 POLR3FQ9H1D9 316 aaPredicted RBP12.12□□□□□ -0.47
SKA2-204ENST00000578519 POLD4Q9HCU8 107 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 PDLIM7Q9NR12 457 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 HSPBP1Q9NZL4 362 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 ARHGAP20Q9P2F6 1191 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 TSKSQ9UJT2 592 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 CDC23Q9UJX2 597 aa12.12□□□□□ -0.47
SKA2-204ENST00000578519 ATP8B3O60423 1300 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms