RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 EVPLQ92817 2033 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 NPHP3-ACAD11A0A0J9YXS1 232 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 M0QZ92 97 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 KINO60870 393 aaKnown RBP14.05□□□□□ -0.16
MKS1-206ENST00000577824 MBD3O95983 291 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 CXCL10P02778 98 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 IQCF3P0C7M6 154 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 SCP2P22307 547 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 NCKAP1LP55160 1127 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 NLRP11P59045 1033 aaKnown RBP14.05□□□□□ -0.16
MKS1-206ENST00000577824 TFDP1Q14186 410 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 DHX8Q14562 1220 aaKnown RBP14.05□□□□□ -0.16
MKS1-206ENST00000577824 GPNMBQ14956 572 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 POSTNQ15063 836 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 PCBP1Q15365 356 aaKnown RBP eCLIP14.05□□□□□ -0.16
MKS1-206ENST00000577824 KIZQ2M2Z5 673 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 FBXO47Q5MNV8 452 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 MFSD5Q6N075 450 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 RHPN2Q8IUC4 686 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 GRAMD1CQ8IYS0 662 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 USP38Q8NB14 1042 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 SPATA20Q8TB22 786 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 TMEM40Q8WWA1 233 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 ARHGAP28Q9P2N2 729 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 ADGRA3Q8IWK6 1321 aa14.05□□□□□ -0.16
MKS1-206ENST00000577824 LAMA2P24043 3122 aaKnown RBP14.05□□□□□ -0.16
MKS1-206ENST00000577824 PVALEFA0A1B0GWK0 134 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 KLRC4O43908 158 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 TBCAO75347 108 aaKnown RBP14.04□□□□□ -0.16
MKS1-206ENST00000577824 KRT18P05783 430 aaKnown RBP14.04□□□□□ -0.16
MKS1-206ENST00000577824 CTSHP09668 335 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 MAPTP10636 758 aaKnown RBP14.04□□□□□ -0.16
MKS1-206ENST00000577824 DARSP14868 501 aaKnown RBP14.04□□□□□ -0.16
MKS1-206ENST00000577824 GAP43P17677 238 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 PTMSP20962 102 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 EIF4BP23588 611 aaKnown RBP14.04□□□□□ -0.16
MKS1-206ENST00000577824 NPTX2P47972 431 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 PTENP60484 403 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 CACNB1Q02641 598 aaPredicted RBP14.04□□□□□ -0.16
MKS1-206ENST00000577824 RAD51AP2Q09MP3 1159 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 DPYDQ12882 1025 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 DMP1Q13316 513 aaPredicted RBP14.04□□□□□ -0.16
MKS1-206ENST00000577824 CUL4BQ13620 913 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 TSHZ1Q6ZSZ6 1077 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 UNC13DQ70J99 1090 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 MAEAQ7L5Y9 396 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 DYMQ7RTS9 669 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 KSR1Q8IVT5 923 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 RNF149Q8NC42 400 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 GPT2Q8TD30 523 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 STAMQ92783 540 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 VWCEQ96DN2 955 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 IFT74Q96LB3 600 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 NLRP4Q96MN2 994 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 OSMRQ99650 979 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 PPP1R12CQ9BZL4 782 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 C2orf40Q9H1Z8 148 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 ST6GALNAC4Q9H4F1 302 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 PRDM5Q9NQX1 630 aaPredicted RBP14.04□□□□□ -0.16
MKS1-206ENST00000577824 KCNG1Q9UIX4 513 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 NR2E3Q9Y5X4 410 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 PHLPP2Q6ZVD8 1323 aa14.04□□□□□ -0.16
MKS1-206ENST00000577824 A0A087WZ62 844 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 NBNO60934 754 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 FAM13AO94988 1023 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 PFKMP08237 780 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 RAG1P15918 1043 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 CYP2C18P33260 490 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 ABCD1P33897 745 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 AFMP43652 599 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 PHKA2P46019 1235 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 TMEM62Q0P6H9 643 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 COASYQ13057 564 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 LPIN1Q14693 890 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 NT5DC1Q5TFE4 455 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 SRGAP1Q7Z6B7 1085 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 CCDC65Q8IXS2 484 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 SLC17A8Q8NDX2 589 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 TMEM161BQ8NDZ6 487 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 NLRP7Q8WX94 980 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 FDXACB1Q9BRP7 624 aaPredicted RBP14.03□□□□□ -0.16
MKS1-206ENST00000577824 STRA6Q9BX79 667 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 GCOM2Q9BZD3 368 aaPredicted RBP14.03□□□□□ -0.16
MKS1-206ENST00000577824 INO80BQ9C086 356 aaPredicted RBP14.03□□□□□ -0.16
MKS1-206ENST00000577824 CCDC113Q9H0I3 377 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 CDHR5Q9HBB8 845 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 PRKAG2Q9UGJ0 569 aa14.03□□□□□ -0.16
MKS1-206ENST00000577824 HOOK1Q9UJC3 728 aaKnown RBP14.03□□□□□ -0.16
MKS1-206ENST00000577824 LAMA3Q16787 3333 aa14.02□□□□□ -0.16
MKS1-206ENST00000577824 MYH11P35749 1972 aa14.02□□□□□ -0.16
MKS1-206ENST00000577824 PPP1R37O75864 691 aa14.02□□□□□ -0.17
MKS1-206ENST00000577824 RHOBTB3O94955 611 aa14.02□□□□□ -0.17
MKS1-206ENST00000577824 CASP1P29466 404 aa14.02□□□□□ -0.17
MKS1-206ENST00000577824 EFNA5P52803 228 aa14.02□□□□□ -0.17
MKS1-206ENST00000577824 PEX3P56589 373 aa14.02□□□□□ -0.17
MKS1-206ENST00000577824 ASIC1P78348 528 aa14.02□□□□□ -0.17
MKS1-206ENST00000577824 MBTD1Q05BQ5 628 aa14.02□□□□□ -0.17
MKS1-206ENST00000577824 KCNB1Q14721 858 aa14.02□□□□□ -0.17
MKS1-206ENST00000577824 AMHR2Q16671 573 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms