RNA–Protein interactions for RNA: ENST00000576761.5

PITPNA-211, Transcript of phosphatidylinositol transfer protein alpha, human

TSL 4

Gene PITPNA, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PITPNA-211	ENST00000576761	PTCRA	Q6ISU1	281 aa	Predicted RBP	28.88	■■■□□ 2.21
PITPNA-211	ENST00000576761	ABI1	Q8IZP0	508 aa		28.88	■■■□□ 2.21
PITPNA-211	ENST00000576761	ZNF579	Q8NAF0	562 aa	Known RBP	28.88	■■■□□ 2.21
PITPNA-211	ENST00000576761	NLRP4	Q96MN2	994 aa		28.88	■■■□□ 2.21
PITPNA-211	ENST00000576761	CASD1	Q96PB1	797 aa		28.88	■■■□□ 2.21
PITPNA-211	ENST00000576761	KIF2C	Q99661	725 aa		28.88	■■■□□ 2.21
PITPNA-211	ENST00000576761	BDP1	A6H8Y1	2624 aa		28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761		H3BQ06	376 aa	Predicted RBP	28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761	EOMES	O95936	686 aa		28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761	UBE3A	Q05086	875 aa		28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761	CTTN	Q14247	550 aa	Known RBP	28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761	CTC1	Q2NKJ3	1217 aa		28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761	KSR1	Q8IVT5	923 aa		28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761	TPH2	Q8IWU9	490 aa		28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761	COLGALT1	Q8NBJ5	622 aa		28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761	CWH43	Q9H720	699 aa		28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761	TTC12	Q9H892	705 aa	Predicted RBP	28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761	SH2B1	Q9NRF2	756 aa	Predicted RBP	28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761	RNF19A	Q9NV58	838 aa		28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761	COL4A3BP	Q9Y5P4	624 aa		28.87	■■■□□ 2.21
PITPNA-211	ENST00000576761	GAS2	O43903	313 aa	Known RBP	28.86	■■■□□ 2.21
PITPNA-211	ENST00000576761	SLITRK3	O94933	977 aa		28.86	■■■□□ 2.21
PITPNA-211	ENST00000576761	LAG3	P18627	525 aa		28.86	■■■□□ 2.21
PITPNA-211	ENST00000576761	GUCY1B3	Q02153	619 aa		28.86	■■■□□ 2.21
PITPNA-211	ENST00000576761	LRRC43	Q8N309	656 aa		28.86	■■■□□ 2.21
PITPNA-211	ENST00000576761	RNF169	Q8NCN4	708 aa		28.86	■■■□□ 2.21
PITPNA-211	ENST00000576761	C8orf76	Q96K31	380 aa		28.86	■■■□□ 2.21
PITPNA-211	ENST00000576761	EIF2AK1	Q9BQI3	630 aa	Known RBP	28.86	■■■□□ 2.21
PITPNA-211	ENST00000576761	HCST	Q9UBK5	93 aa		28.86	■■■□□ 2.21
PITPNA-211	ENST00000576761	GRXCR2	A6NFK2	248 aa		28.85	■■■□□ 2.21
PITPNA-211	ENST00000576761	WNT7A	O00755	349 aa		28.85	■■■□□ 2.21
PITPNA-211	ENST00000576761	FGF18	O76093	207 aa		28.85	■■■□□ 2.21
PITPNA-211	ENST00000576761	TXK	P42681	527 aa		28.85	■■■□□ 2.21
PITPNA-211	ENST00000576761	HMGN5	P82970	282 aa	Known RBP	28.85	■■■□□ 2.21
PITPNA-211	ENST00000576761	XKR9	Q5GH70	373 aa		28.85	■■■□□ 2.21
PITPNA-211	ENST00000576761	ZNF598	Q86UK7	904 aa	Known RBP	28.85	■■■□□ 2.21
PITPNA-211	ENST00000576761	THNSL1	Q8IYQ7	743 aa		28.85	■■■□□ 2.21
PITPNA-211	ENST00000576761	TCP11	Q8WWU5	503 aa		28.85	■■■□□ 2.21
PITPNA-211	ENST00000576761	PSPC1	Q8WXF1	523 aa	Known RBP	28.85	■■■□□ 2.21
PITPNA-211	ENST00000576761	TRAIP	Q9BWF2	469 aa		28.85	■■■□□ 2.21
PITPNA-211	ENST00000576761	IGFLR1	Q9H665	355 aa		28.85	■■■□□ 2.21
PITPNA-211	ENST00000576761	IFT122	Q9HBG6	1241 aa		28.85	■■■□□ 2.21
PITPNA-211	ENST00000576761	IRS1	P35568	1242 aa		28.84	■■■□□ 2.21
PITPNA-211	ENST00000576761	LTBR	P36941	435 aa		28.84	■■■□□ 2.21
PITPNA-211	ENST00000576761	EMC2	Q15006	297 aa		28.84	■■■□□ 2.21
PITPNA-211	ENST00000576761	CATSPER4	Q7RTX7	472 aa		28.84	■■■□□ 2.21
PITPNA-211	ENST00000576761	PRPF31	Q8WWY3	499 aa	Known RBP	28.84	■■■□□ 2.21
PITPNA-211	ENST00000576761	TMEM143	Q96AN5	459 aa		28.84	■■■□□ 2.21
PITPNA-211	ENST00000576761	MTMR9	Q96QG7	549 aa		28.84	■■■□□ 2.21
PITPNA-211	ENST00000576761	HSD17B14	Q9BPX1	270 aa		28.84	■■■□□ 2.21
PITPNA-211	ENST00000576761	PIN4	Q9Y237	131 aa	Known RBP	28.84	■■■□□ 2.21
PITPNA-211	ENST00000576761	FAM50B	Q9Y247	325 aa		28.84	■■■□□ 2.21
PITPNA-211	ENST00000576761	ZBTB39	O15060	712 aa		28.83	■■■□□ 2.21
PITPNA-211	ENST00000576761	LYPLA2	O95372	231 aa		28.83	■■■□□ 2.21
PITPNA-211	ENST00000576761	IL9	P15248	144 aa		28.83	■■■□□ 2.21
PITPNA-211	ENST00000576761	CLLU1OS	Q5K130	101 aa		28.83	■■■□□ 2.21
PITPNA-211	ENST00000576761	TWF2	Q6IBS0	349 aa	Known RBP	28.83	■■■□□ 2.21
PITPNA-211	ENST00000576761	LRRC55	Q6ZSA7	311 aa		28.83	■■■□□ 2.21
PITPNA-211	ENST00000576761	TLR9	Q9NR96	1032 aa		28.83	■■■□□ 2.21
PITPNA-211	ENST00000576761	BMP2K	Q9NSY1	1161 aa	Predicted RBP	28.83	■■■□□ 2.21
PITPNA-211	ENST00000576761	ASAP2	O43150	1006 aa		28.82	■■■□□ 2.2
PITPNA-211	ENST00000576761	SKI	P12755	728 aa		28.82	■■■□□ 2.2
PITPNA-211	ENST00000576761	ATF7	P17544	494 aa	Predicted RBP	28.82	■■■□□ 2.2
PITPNA-211	ENST00000576761	GTF2F1	P35269	517 aa	Known RBP eCLIP	28.82	■■■□□ 2.2	1e-7	■■■■■ 39.4
PITPNA-211	ENST00000576761	PHKA2	P46019	1235 aa		28.82	■■■□□ 2.2
PITPNA-211	ENST00000576761	SRGAP1	Q7Z6B7	1085 aa		28.82	■■■□□ 2.2
PITPNA-211	ENST00000576761	FAM178B	Q8IXR5	827 aa		28.82	■■■□□ 2.2
PITPNA-211	ENST00000576761	MTR	Q99707	1265 aa		28.82	■■■□□ 2.2
PITPNA-211	ENST00000576761	FOXP1	Q9H334	677 aa	Predicted RBP	28.82	■■■□□ 2.2
PITPNA-211	ENST00000576761	SRGAP2C	P0DJJ0	459 aa		28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	ATP2B1	P20020	1258 aa		28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	MCM7	P33993	719 aa		28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	RBM25	P49756	843 aa	Known RBP	28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	LAMTOR4	Q0VGL1	99 aa		28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	ADAM15	Q13444	863 aa		28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	ADGRD2	Q7Z7M1	963 aa		28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	FAM184A	Q8NB25	1140 aa		28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	HELQ	Q8TDG4	1101 aa		28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	MICAL1	Q8TDZ2	1067 aa		28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	RSPH1	Q8WYR4	309 aa		28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	ZNF558	Q96NG5	402 aa		28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	MRPL9	Q9BYD2	267 aa	Known RBP	28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	LZTS1	Q9Y250	596 aa		28.81	■■■□□ 2.2
PITPNA-211	ENST00000576761	RAB27A	P51159	221 aa		28.8	■■■□□ 2.2
PITPNA-211	ENST00000576761	PLCB3	Q01970	1234 aa		28.8	■■■□□ 2.2
PITPNA-211	ENST00000576761	DLX2	Q07687	328 aa	Predicted RBP	28.8	■■■□□ 2.2
PITPNA-211	ENST00000576761	PDE12	Q6L8Q7	609 aa	Known RBP	28.8	■■■□□ 2.2
PITPNA-211	ENST00000576761	KCNT2	Q6UVM3	1135 aa		28.8	■■■□□ 2.2
PITPNA-211	ENST00000576761	FERMT3	Q86UX7	667 aa		28.8	■■■□□ 2.2
PITPNA-211	ENST00000576761	FBXO18	Q8NFZ0	1043 aa		28.8	■■■□□ 2.2
PITPNA-211	ENST00000576761	TMEM60	Q9H2L4	133 aa		28.8	■■■□□ 2.2
PITPNA-211	ENST00000576761	ANKEF1	Q9NU02	776 aa		28.8	■■■□□ 2.2
PITPNA-211	ENST00000576761	PUF60	Q9UHX1	559 aa	Known RBP	28.8	■■■□□ 2.2
PITPNA-211	ENST00000576761	LINC01565	O15544	149 aa		28.79	■■■□□ 2.2
PITPNA-211	ENST00000576761	TBX10	O75333	385 aa		28.79	■■■□□ 2.2
PITPNA-211	ENST00000576761	PPM1A	P35813	382 aa		28.79	■■■□□ 2.2
PITPNA-211	ENST00000576761	NRIP1	P48552	1158 aa		28.79	■■■□□ 2.2
PITPNA-211	ENST00000576761	ORC2	Q13416	577 aa	Predicted RBP	28.79	■■■□□ 2.2
PITPNA-211	ENST00000576761	EFHB	Q8N7U6	833 aa		28.79	■■■□□ 2.2
PITPNA-211	ENST00000576761	MRPS27	Q92552	414 aa	Known RBP	28.79	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 78 ms