RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 POLGP54098 1239 aaPredicted RBP19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 VCX3BQ9H321 246 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 TCRBV5S4A2TA0A5A2 114 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 H0YIN7 160 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 MT-ND3P03897 115 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 SOX5P35711 763 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 CASP4P49662 377 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 GRB10Q13322 594 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 C2CD6Q53TS8 623 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 NT5DC1Q5TFE4 455 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 ELOA2Q8IYF1 753 aaPredicted RBP19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 ZNF668Q96K58 619 aaPredicted RBP19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 DUSP9Q99956 384 aaKnown RBP19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 ZWILCHQ9H900 591 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 DIP2CQ9Y2E4 1556 aa19.19■□□□□ 0.66
ATPAF1-214ENST00000576409 RSPH10B2B2RC85 870 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 ZBED4O75132 1171 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 STAM2O75886 525 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 RSPH10BP0C881 870 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 NBPF9Q3BBW0 867 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 MTERF2Q49AM1 385 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 PADI6Q6TGC4 694 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 TLR10Q9BXR5 811 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 WDR11Q9BZH6 1224 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 EDEM3Q9BZQ6 932 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 PI4KBQ9UBF8 816 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 NAGPAQ9UK23 515 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 RNF8O76064 485 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 TFAMQ00059 246 aaKnown RBP19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 KRT81Q14533 505 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 AOC3Q16853 763 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 RFX6Q8HWS3 928 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 PYROXD1Q8WU10 500 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 NUDT12Q9BQG2 462 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 EIF2AK1Q9BQI3 630 aaKnown RBP19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 SPZ1Q9BXG8 430 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 OSGEPQ9NPF4 335 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 EPHB6O15197 1021 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 ESRRAP11474 423 aaPredicted RBP19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 EEPD1Q7L9B9 569 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 ADAM22Q9P0K1 906 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 ARHGEF28Q8N1W1 1705 aaKnown RBP19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 hCG_1984214I3L0E3 225 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 RAD17O75943 681 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 BYSLQ13895 437 aaKnown RBP19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 NXNQ6DKJ4 435 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 ZNF713Q8N859 430 aaPredicted RBP19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 XXYLT1Q8NBI6 393 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 KIAA0895Q8NCT3 520 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 MTMR4Q9NYA4 1195 aa19.18■□□□□ 0.66
ATPAF1-214ENST00000576409 MIF4GDA9UHW6 222 aaKnown RBP19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 ZBTB33Q86T24 672 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 LRRC37BQ96QE4 947 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 TXLNGQ9NUQ3 528 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 MAD2L2Q9UI95 211 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 ALG6Q9Y672 507 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 ELF1P32519 619 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 HADHQ16836 314 aaKnown RBP19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 TMCO4Q5TGY1 634 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 ZC3H18Q86VM9 953 aaKnown RBP19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 CREG2Q8IUH2 290 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 CFAP57Q96MR6 1250 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 SYF2O95926 243 aaKnown RBP19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 TMEM191BP0C7N4 346 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 PDHBP11177 359 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 PDIA5Q14554 519 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 EAPPQ56P03 285 aaPredicted RBP19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 C4orf33Q8N1A6 199 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 BBOF1Q8ND07 529 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 MIPOL1Q8TD10 442 aa19.17■□□□□ 0.66
ATPAF1-214ENST00000576409 CFAP69A5D8W1 941 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 PPEF1O14829 653 aaPredicted RBP19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 KITP10721 976 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 USP11P51784 963 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 KLHDC7AQ5VTJ3 777 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 JAMLQ86YT9 394 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 RAPGEF5Q92565 580 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 PPP1R16BQ96T49 567 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 SEPT10Q9P0V9 454 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 MAPK13O15264 365 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 CAMTA2O94983 1202 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 KRT17Q04695 432 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 DTX3LQ8TDB6 740 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 USP21Q9UK80 565 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 VAMP7P51809 220 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 RAD23BP54727 409 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 DNAJC24Q6P3W2 148 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 WDR59Q6PJI9 974 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 FBXO25Q8TCJ0 367 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 ARHGEF1Q92888 912 aaKnown RBP19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 KLF6Q99612 283 aaPredicted RBP19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 TRIM4Q9C037 500 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 ISCUQ9H1K1 167 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 TMEM206Q9H813 350 aa19.16■□□□□ 0.66
ATPAF1-214ENST00000576409 CHRNA3P32297 505 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 PDE1BQ01064 536 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 TMEM270Q6UE05 265 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 LRRC34Q8IZ02 419 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 BTBD6Q96KE9 485 aa19.15■□□□□ 0.66
ATPAF1-214ENST00000576409 F5H423 210 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms