RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 NBR1Q14596 966 aa13.31□□□□□ -0.28
LITAF-219ENST00000576334 XKR9Q5GH70 373 aa13.31□□□□□ -0.28
LITAF-219ENST00000576334 C4orf19Q8IY42 314 aa13.31□□□□□ -0.28
LITAF-219ENST00000576334 PRPF31Q8WWY3 499 aaKnown RBP13.31□□□□□ -0.28
LITAF-219ENST00000576334 LPPQ93052 612 aa13.31□□□□□ -0.28
LITAF-219ENST00000576334 MTMR9Q96QG7 549 aa13.31□□□□□ -0.28
LITAF-219ENST00000576334 PLVAPQ9BX97 442 aa13.31□□□□□ -0.28
LITAF-219ENST00000576334 GCOM2Q9BZD3 368 aaPredicted RBP13.31□□□□□ -0.28
LITAF-219ENST00000576334 DHX33Q9H6R0 707 aaKnown RBP13.31□□□□□ -0.28
LITAF-219ENST00000576334 TTC12Q9H892 705 aaPredicted RBP13.31□□□□□ -0.28
LITAF-219ENST00000576334 IFT122Q9HBG6 1241 aa13.31□□□□□ -0.28
LITAF-219ENST00000576334 PCDHA12Q9UN75 941 aa13.31□□□□□ -0.28
LITAF-219ENST00000576334 RWDD3Q9Y3V2 267 aa13.31□□□□□ -0.28
LITAF-219ENST00000576334 BAG4O95429 457 aaKnown RBP13.3□□□□□ -0.28
LITAF-219ENST00000576334 SRGAP2CP0DJJ0 459 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 DNM2P50570 870 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 POLGP54098 1239 aaPredicted RBP13.3□□□□□ -0.28
LITAF-219ENST00000576334 ZNF174Q15697 407 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 LEXMQ3ZCV2 418 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 ODR4Q5SWX8 454 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 PTCRAQ6ISU1 281 aaPredicted RBP13.3□□□□□ -0.28
LITAF-219ENST00000576334 RBM23Q86U06 439 aaKnown RBP13.3□□□□□ -0.28
LITAF-219ENST00000576334 ZNF598Q86UK7 904 aaKnown RBP13.3□□□□□ -0.28
LITAF-219ENST00000576334 SLFN12Q8IYM2 578 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 COLGALT1Q8NBJ5 622 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 NEK9Q8TD19 979 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 HELQQ8TDG4 1101 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 PIGOQ8TEQ8 1089 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 P2RX5Q93086 422 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 PABPC5Q96DU9 382 aaKnown RBP13.3□□□□□ -0.28
LITAF-219ENST00000576334 C8orf76Q96K31 380 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 NAP1L4Q99733 375 aaKnown RBP13.3□□□□□ -0.28
LITAF-219ENST00000576334 HSD17B14Q9BPX1 270 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 ELAC1Q9H777 363 aaKnown RBP13.3□□□□□ -0.28
LITAF-219ENST00000576334 XPNPEP1Q9NQW7 623 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 COL4A3BPQ9Y5P4 624 aa13.3□□□□□ -0.28
LITAF-219ENST00000576334 A0A0U1RQF3 1178 aa13.29□□□□□ -0.28
LITAF-219ENST00000576334 PER2O15055 1255 aa13.29□□□□□ -0.28
LITAF-219ENST00000576334 TBX10O75333 385 aa13.29□□□□□ -0.28
LITAF-219ENST00000576334 FGF18O76093 207 aa13.29□□□□□ -0.28
LITAF-219ENST00000576334 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
LITAF-219ENST00000576334 ERVFC1P60507 584 aa13.29□□□□□ -0.28
LITAF-219ENST00000576334 LAMTOR4Q0VGL1 99 aa13.29□□□□□ -0.28
LITAF-219ENST00000576334 COL19A1Q14993 1142 aa13.29□□□□□ -0.28
LITAF-219ENST00000576334 EMC2Q15006 297 aa13.29□□□□□ -0.28
LITAF-219ENST00000576334 CTC1Q2NKJ3 1217 aa13.29□□□□□ -0.28
LITAF-219ENST00000576334 SLC7A3Q8WY07 619 aa13.29□□□□□ -0.28
LITAF-219ENST00000576334 LMAN2LQ9H0V9 348 aa13.29□□□□□ -0.28
LITAF-219ENST00000576334 ZSWIM4Q9H7M6 989 aa13.29□□□□□ -0.28
LITAF-219ENST00000576334 RAPGEFL1Q9UHV5 662 aa13.29□□□□□ -0.28
LITAF-219ENST00000576334 PIN4Q9Y237 131 aaKnown RBP13.29□□□□□ -0.28
LITAF-219ENST00000576334 GRXCR2A6NFK2 248 aa13.28□□□□□ -0.28
LITAF-219ENST00000576334 NT5C1B-RDH14C9J2C7 533 aa13.28□□□□□ -0.28
LITAF-219ENST00000576334 EIF5BO60841 1220 aaKnown RBP13.28□□□□□ -0.28
LITAF-219ENST00000576334 SPATA31C1P0DKV0 1188 aa13.28□□□□□ -0.28
LITAF-219ENST00000576334 PHKA2P46019 1235 aa13.28□□□□□ -0.28
LITAF-219ENST00000576334 NRIP1P48552 1158 aa13.28□□□□□ -0.28
LITAF-219ENST00000576334 AFF1P51825 1210 aaKnown RBP13.28□□□□□ -0.28
LITAF-219ENST00000576334 TWF2Q6IBS0 349 aaKnown RBP13.28□□□□□ -0.28
LITAF-219ENST00000576334 CATSPER4Q7RTX7 472 aa13.28□□□□□ -0.28
LITAF-219ENST00000576334 THNSL1Q8IYQ7 743 aa13.28□□□□□ -0.28
LITAF-219ENST00000576334 FBXO18Q8NFZ0 1043 aa13.28□□□□□ -0.28
LITAF-219ENST00000576334 ZSCAN31Q96LW9 406 aaPredicted RBP13.28□□□□□ -0.28
LITAF-219ENST00000576334 LLPHQ9BRT6 129 aaKnown RBP13.28□□□□□ -0.28
LITAF-219ENST00000576334 TMEM117Q9H0C3 514 aa13.28□□□□□ -0.28
LITAF-219ENST00000576334 EPHX3Q9H6B9 360 aa13.28□□□□□ -0.28
LITAF-219ENST00000576334 PCDHB12Q9Y5F1 795 aa13.28□□□□□ -0.28
LITAF-219ENST00000576334 TRIOO75962 3097 aa13.28□□□□□ -0.28
LITAF-219ENST00000576334 B4GALT3O60512 393 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 DKC1O60832 514 aaKnown RBP eCLIP13.27□□□□□ -0.29
LITAF-219ENST00000576334 MED24O75448 989 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 GLP2RO95838 553 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 HOXA11P31270 313 aaPredicted RBP13.27□□□□□ -0.29
LITAF-219ENST00000576334 TECP42680 631 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 ADAM15Q13444 863 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 SAFBQ15424 915 aaKnown RBP eCLIP13.27□□□□□ -0.29
LITAF-219ENST00000576334 NAALADL2Q58DX5 795 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 MAEAQ7L5Y9 396 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 FERMT3Q86UX7 667 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 ZNF410Q86VK4 478 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 RNF149Q8NC42 400 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 VN1R2Q8NFZ6 395 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 ASAP3Q8TDY4 903 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 MICAL1Q8TDZ2 1067 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 PSPC1Q8WXF1 523 aaKnown RBP13.27□□□□□ -0.29
LITAF-219ENST00000576334 MTRQ99707 1265 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 GPRC5CQ9NQ84 441 aa13.27□□□□□ -0.29
LITAF-219ENST00000576334 SFPQP23246 707 aaKnown RBP eCLIP13.26□□□□□ -0.29
LITAF-219ENST00000576334 RFC5P40937 340 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 RARRES1P49788 294 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 TOB1P50616 345 aaPredicted RBP13.26□□□□□ -0.29
LITAF-219ENST00000576334 TTC38Q5R3I4 469 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 UBXN11Q5T124 520 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 PLPP4Q5VZY2 271 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 POTEGQ6S5H5 508 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 KCNT2Q6UVM3 1135 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 OTUD6AQ7L8S5 288 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 TMEM173Q86WV6 379 aaPredicted RBP13.26□□□□□ -0.29
LITAF-219ENST00000576334 CATSPER3Q86XQ3 398 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 FAM178BQ8IXR5 827 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms