RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 MAGEB2O15479 319 aa18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 CSDE1O75534 798 aaKnown RBP18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 GALTP07902 379 aa18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 CLCN4P51793 760 aa18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 NUCB1Q02818 461 aa18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 PTPN14Q15678 1187 aa18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 C1orf210Q8IVY1 113 aa18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 LPPQ93052 612 aa18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 KLHL5Q96PQ7 755 aa18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 ANO3Q9BYT9 981 aa18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 DACT1Q9NYF0 836 aa18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 CEP131Q9UPN4 1083 aa18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 INPP5FQ9Y2H2 1132 aa18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 MAFBQ9Y5Q3 323 aaPredicted RBP18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 TPRP12270 2363 aaKnown RBP18.45■□□□□ 0.54
CTDNEP1-211ENST00000575783 DHX15O43143 795 aaKnown RBP18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 PRC1O43663 620 aa18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 FOSP01100 380 aaPredicted RBP18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 CNPP09543 421 aaKnown RBP18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 MYBP10242 640 aa18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 DARSP14868 501 aaKnown RBP18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 NAPAP54920 295 aa18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 RNASELQ05823 741 aaKnown RBP18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 C15orf39Q6ZRI6 1047 aa18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 PLA2G4DQ86XP0 818 aa18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 GPR152Q8TDT2 470 aa18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 NLRP7Q8WX94 980 aa18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 RWDD1Q9H446 243 aaPredicted RBP18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 NRDE2Q9H7Z3 1164 aa18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 RIC8AQ9NPQ8 531 aa18.44■□□□□ 0.54
CTDNEP1-211ENST00000575783 IPO5O00410 1097 aaKnown RBP18.43■□□□□ 0.54
CTDNEP1-211ENST00000575783 GPC3P51654 580 aa18.43■□□□□ 0.54
CTDNEP1-211ENST00000575783 WWC2Q6AWC2 1192 aa18.43■□□□□ 0.54
CTDNEP1-211ENST00000575783 TMTC2Q8N394 836 aa18.43■□□□□ 0.54
CTDNEP1-211ENST00000575783 VN1R3Q9BXE9 311 aa18.43■□□□□ 0.54
CTDNEP1-211ENST00000575783 TBC1D13Q9NVG8 400 aa18.43■□□□□ 0.54
CTDNEP1-211ENST00000575783 GABBR1Q9UBS5 961 aa18.43■□□□□ 0.54
CTDNEP1-211ENST00000575783 DNAJB4Q9UDY4 337 aa18.43■□□□□ 0.54
CTDNEP1-211ENST00000575783 TCEAL9Q9UHQ7 104 aa18.43■□□□□ 0.54
CTDNEP1-211ENST00000575783 CCDC195A0A1B0GUA6 201 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 FAM86B1E9PN63 330 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 FAM86B2P0C5J1 330 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 CALM1P0DP23 149 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 CALM2P0DP24 149 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 CALM3P0DP25 149 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 SRFP11831 508 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 PHKA2P46019 1235 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 SLC11A1P49279 550 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 ADCY7P51828 1080 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 NOMO2Q5JPE7 1267 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 TYW1BQ6NUM6 668 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 GLB1LQ6UWU2 654 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 NIPA1Q7RTP0 329 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 ZNF710Q8N1W2 664 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 SUMF1Q8NBK3 374 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 RUFY2Q8WXA3 655 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 STAMQ92783 540 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 ZNF577Q9BSK1 485 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 DLGAP2Q9P1A6 1054 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 ACACBO00763 2458 aa18.42■□□□□ 0.54
CTDNEP1-211ENST00000575783 OTOGLQ3ZCN5 2332 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 CARNS1A5YM72 827 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 POTEMA6NI47 508 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 SH2B2O14492 632 aaPredicted RBP18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 C2CD2LO14523 706 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 KINO60870 393 aaKnown RBP18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 PSAPP07602 524 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 SREBF1P36956 1147 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 TWF2Q6IBS0 349 aaKnown RBP18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 PHLDB3Q6NSJ2 640 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 POTEGQ6S5H5 508 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 TMTC3Q6ZXV5 915 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 LINC01465Q8N7H1 131 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 FANCBQ8NB91 859 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 ST13P5Q8NFI4 369 aaPredicted RBP18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 MYADMQ96S97 322 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 WDR6Q9NNW5 1121 aaKnown RBP18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 MAN1C1Q9NR34 630 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 ARHGEF3Q9NR81 526 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 MRPL17Q9NRX2 175 aaKnown RBP18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 NCDNQ9UBB6 729 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 SAMM50Q9Y512 469 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 PCDHA10Q9Y5I2 948 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 SLC12A7Q9Y666 1083 aa18.41■□□□□ 0.54
CTDNEP1-211ENST00000575783 CFAP47Q6ZTR5 3102 aa18.4■□□□□ 0.54
CTDNEP1-211ENST00000575783 SMCO2A6NFE2 343 aa18.4■□□□□ 0.54
CTDNEP1-211ENST00000575783 MEIS3P2A8K0S8 358 aa18.4■□□□□ 0.54
CTDNEP1-211ENST00000575783 IGHDP01880 384 aa18.4■□□□□ 0.54
CTDNEP1-211ENST00000575783 ATXN1P54253 815 aaKnown RBP18.4■□□□□ 0.54
CTDNEP1-211ENST00000575783 ZNF746Q6NUN9 644 aaPredicted RBP18.4■□□□□ 0.54
CTDNEP1-211ENST00000575783 DCLRE1AQ6PJP8 1040 aa18.4■□□□□ 0.54
CTDNEP1-211ENST00000575783 ZNF280BQ86YH2 543 aa18.4■□□□□ 0.54
CTDNEP1-211ENST00000575783 FOXQ1Q9C009 403 aa18.4■□□□□ 0.54
CTDNEP1-211ENST00000575783 CHST12Q9NRB3 414 aa18.4■□□□□ 0.54
CTDNEP1-211ENST00000575783 NRBP2Q9NSY0 501 aa18.4■□□□□ 0.54
CTDNEP1-211ENST00000575783 TBC1D22BQ9NU19 505 aa18.4■□□□□ 0.54
CTDNEP1-211ENST00000575783 EPS15L1Q9UBC2 864 aa18.4■□□□□ 0.54
CTDNEP1-211ENST00000575783 GPR179Q6PRD1 2367 aa18.39■□□□□ 0.53
CTDNEP1-211ENST00000575783 LRRN2O75325 713 aa18.39■□□□□ 0.53
CTDNEP1-211ENST00000575783 OFD1O75665 1012 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms