RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 ATG2AQ2TAZ0 1938 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 ZBTB39O15060 712 aa13.37□□□□□ -0.27
USP43-206ENST00000575346 GRM6O15303 877 aa13.37□□□□□ -0.27
USP43-206ENST00000575346 EOMESO95936 686 aa13.37□□□□□ -0.27
USP43-206ENST00000575346 SFPQP23246 707 aaKnown RBP eCLIP13.37□□□□□ -0.27
USP43-206ENST00000575346 MCM7P33993 719 aa13.37□□□□□ -0.27
USP43-206ENST00000575346 CAMK1Q14012 370 aa13.37□□□□□ -0.27
USP43-206ENST00000575346 PAN2Q504Q3 1202 aaKnown RBP13.37□□□□□ -0.27
USP43-206ENST00000575346 XKR9Q5GH70 373 aa13.37□□□□□ -0.27
USP43-206ENST00000575346 SRGAP1Q7Z6B7 1085 aa13.37□□□□□ -0.27
USP43-206ENST00000575346 ZNF598Q86UK7 904 aaKnown RBP13.37□□□□□ -0.27
USP43-206ENST00000575346 SPPL3Q8TCT6 385 aa13.37□□□□□ -0.27
USP43-206ENST00000575346 PSPC1Q8WXF1 523 aaKnown RBP13.37□□□□□ -0.27
USP43-206ENST00000575346 RSPH1Q8WYR4 309 aa13.37□□□□□ -0.27
USP43-206ENST00000575346 TMX3Q96JJ7 454 aa13.37□□□□□ -0.27
USP43-206ENST00000575346 TMEM117Q9H0C3 514 aa13.37□□□□□ -0.27
USP43-206ENST00000575346 POTEMA6NI47 508 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 TBKBP1A7MCY6 615 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 NCK2O43639 380 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 ZNF623O75123 536 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 DGAT1O75907 488 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 ITGB1P05556 798 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 OR52Z1P0C646 297 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 SPATA31C1P0DKV0 1188 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 FGFR4P22455 802 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 RARRES1P49788 294 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 POU5F1BQ06416 359 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 EMC2Q15006 297 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 PCBP1Q15365 356 aaKnown RBP eCLIP13.36□□□□□ -0.27
USP43-206ENST00000575346 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 TTC38Q5R3I4 469 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 FERMT3Q86UX7 667 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 IFNLR1Q8IU57 520 aaPredicted RBP13.36□□□□□ -0.27
USP43-206ENST00000575346 KSR1Q8IVT5 923 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 C4orf32Q8N8J7 132 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 KLHL23Q8NBE8 558 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 PRPF31Q8WWY3 499 aaKnown RBP13.36□□□□□ -0.27
USP43-206ENST00000575346 NLRP4Q96MN2 994 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 CASD1Q96PB1 797 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 MTRQ99707 1265 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 POLR3CQ9BUI4 534 aaPredicted RBP13.36□□□□□ -0.27
USP43-206ENST00000575346 CWH43Q9H720 699 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 UBE2ZQ9H832 354 aaPredicted RBP13.36□□□□□ -0.27
USP43-206ENST00000575346 TUFT1Q9NNX1 390 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 XPNPEP1Q9NQW7 623 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 AAASQ9NRG9 546 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 KIF3AQ9Y496 699 aa13.36□□□□□ -0.27
USP43-206ENST00000575346 CSDE1O75534 798 aaKnown RBP13.35□□□□□ -0.27
USP43-206ENST00000575346 CD2BP2O95400 341 aaKnown RBP13.35□□□□□ -0.27
USP43-206ENST00000575346 FGFR1P11362 822 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 SKIP12755 728 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 ATF7P17544 494 aaPredicted RBP13.35□□□□□ -0.27
USP43-206ENST00000575346 ATP2B1P20020 1258 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 MUTP22033 750 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 PHKA2P46019 1235 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 KCNQ1P51787 676 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 UBE3AQ05086 875 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 LAMTOR4Q0VGL1 99 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 MXD4Q14582 209 aaPredicted RBP13.35□□□□□ -0.27
USP43-206ENST00000575346 ZNF174Q15697 407 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 LEXMQ3ZCV2 418 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 TCEAL5Q5H9L2 206 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 CATSPER3Q86XQ3 398 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 TMEM143Q96AN5 459 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 PABPC5Q96DU9 382 aaKnown RBP13.35□□□□□ -0.27
USP43-206ENST00000575346 ALG13Q9NP73 1137 aaKnown RBP13.35□□□□□ -0.27
USP43-206ENST00000575346 AGPAT5Q9NUQ2 364 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 TYW1Q9NV66 732 aaKnown RBP13.35□□□□□ -0.27
USP43-206ENST00000575346 NOL7Q9UMY1 257 aaKnown RBP13.35□□□□□ -0.27
USP43-206ENST00000575346 PCDHB12Q9Y5F1 795 aa13.35□□□□□ -0.27
USP43-206ENST00000575346 PLXNA4Q9HCM2 1894 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 MED24O75448 989 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 LAG3P18627 525 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 RPA1P27694 616 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 ARL2P36404 184 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 TECP42680 631 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 TOB1P50616 345 aaPredicted RBP13.34□□□□□ -0.27
USP43-206ENST00000575346 FXR2P51116 673 aaKnown RBP eCLIP13.34□□□□□ -0.27
USP43-206ENST00000575346 RAB27AP51159 221 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 GNL2Q13823 731 aaKnown RBP13.34□□□□□ -0.27
USP43-206ENST00000575346 CTC1Q2NKJ3 1217 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 CLLU1OSQ5K130 101 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 LRRC55Q6ZSA7 311 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 CATSPER4Q7RTX7 472 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 LRRC43Q8N309 656 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 RNF149Q8NC42 400 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 NECAB3Q96P71 396 aaPredicted RBP13.34□□□□□ -0.27
USP43-206ENST00000575346 NFKBIZQ9BYH8 718 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 FAM105AQ9NUU6 356 aa13.34□□□□□ -0.27
USP43-206ENST00000575346 DBR1Q9UK59 544 aaKnown RBP13.34□□□□□ -0.27
USP43-206ENST00000575346 SRGAP2CP0DJJ0 459 aa13.33□□□□□ -0.28
USP43-206ENST00000575346 DNAJB1P25685 340 aa13.33□□□□□ -0.28
USP43-206ENST00000575346 HOXA11P31270 313 aaPredicted RBP13.33□□□□□ -0.28
USP43-206ENST00000575346 PTENP60484 403 aa13.33□□□□□ -0.28
USP43-206ENST00000575346 PLCB3Q01970 1234 aa13.33□□□□□ -0.28
USP43-206ENST00000575346 PDIA5Q14554 519 aa13.33□□□□□ -0.28
USP43-206ENST00000575346 ABI1Q8IZP0 508 aa13.33□□□□□ -0.28
USP43-206ENST00000575346 COLGALT1Q8NBJ5 622 aa13.33□□□□□ -0.28
USP43-206ENST00000575346 ERMNQ8TAM6 284 aa13.33□□□□□ -0.28
USP43-206ENST00000575346 PIGOQ8TEQ8 1089 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms