RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 IGSF9BQ9UPX0 1349 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 ARHGEF35A5YM69 484 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 H0YGN5 161 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 BUB1BO60566 1050 aaPredicted RBP9.71□□□□□ -0.85
NCBP3-204ENST00000574911 CCDC172P0C7W6 258 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 HSD17B3P37058 310 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 MAGEA9P43362 315 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 CCT5P48643 541 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 POU5F1Q01860 360 aaKnown RBP9.71□□□□□ -0.85
NCBP3-204ENST00000574911 BFSP1Q12934 665 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 UAP1Q16222 522 aaPredicted RBP9.71□□□□□ -0.85
NCBP3-204ENST00000574911 TTC19Q6DKK2 380 aaPredicted RBP9.71□□□□□ -0.85
NCBP3-204ENST00000574911 PHLDB3Q6NSJ2 640 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 DDX42Q86XP3 938 aaKnown RBP eCLIP9.71□□□□□ -0.85
NCBP3-204ENST00000574911 SUPT20HQ8NEM7 779 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 NEK9Q8TD19 979 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 BCAS4Q8TDM0 211 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 SEC14L1Q92503 715 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 ATP6V1G3Q96LB4 118 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 RNPC3Q96LT9 517 aaKnown RBP9.71□□□□□ -0.85
NCBP3-204ENST00000574911 RIT2Q99578 217 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 TMBIM4Q9HC24 238 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 TMOD2Q9NZR1 351 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 ZNF70Q9UC06 446 aaPredicted RBP9.71□□□□□ -0.85
NCBP3-204ENST00000574911 DIS3Q9Y2L1 958 aaKnown RBP9.71□□□□□ -0.85
NCBP3-204ENST00000574911 NFS1Q9Y697 457 aa9.71□□□□□ -0.85
NCBP3-204ENST00000574911 SMCHD1A6NHR9 2005 aa9.71□□□□□ -0.86
NCBP3-204ENST00000574911 CLRN2A0PK11 232 aa9.71□□□□□ -0.86
NCBP3-204ENST00000574911 HMGB1P1B2RPK0 211 aaPredicted RBP9.71□□□□□ -0.86
NCBP3-204ENST00000574911 IPO5O00410 1097 aaKnown RBP9.71□□□□□ -0.86
NCBP3-204ENST00000574911 MAPTP10636 758 aaKnown RBP9.71□□□□□ -0.86
NCBP3-204ENST00000574911 RFX1P22670 979 aa9.71□□□□□ -0.86
NCBP3-204ENST00000574911 PDCLQ13371 301 aa9.71□□□□□ -0.86
NCBP3-204ENST00000574911 HLTFQ14527 1009 aaKnown RBP eCLIP9.71□□□□□ -0.86
NCBP3-204ENST00000574911 PLS1Q14651 629 aa9.71□□□□□ -0.86
NCBP3-204ENST00000574911 LDHDQ86WU2 507 aa9.71□□□□□ -0.86
NCBP3-204ENST00000574911 PROCA1Q8NCQ7 364 aaPredicted RBP9.71□□□□□ -0.86
NCBP3-204ENST00000574911 CCDC26Q8TAB7 109 aa9.71□□□□□ -0.86
NCBP3-204ENST00000574911 LRRC45Q96CN5 670 aa9.71□□□□□ -0.86
NCBP3-204ENST00000574911 ARHGEF26Q96DR7 871 aa9.71□□□□□ -0.86
NCBP3-204ENST00000574911 FEM1BQ9UK73 627 aa9.71□□□□□ -0.86
NCBP3-204ENST00000574911 PPP1R9AQ9ULJ8 1098 aa9.71□□□□□ -0.86
NCBP3-204ENST00000574911 RPTORQ8N122 1335 aa9.71□□□□□ -0.86
NCBP3-204ENST00000574911 EXOC3O60645 756 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 APBA3O96018 575 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 TNFAIP3P21580 790 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 ATP1A2P50993 1020 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 HSD17B4P51659 736 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 RSBN1LQ6PCB5 846 aaPredicted RBP9.7□□□□□ -0.86
NCBP3-204ENST00000574911 MAATS1Q7Z4T9 603 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 CTNNBL1Q8WYA6 563 aaPredicted RBP9.7□□□□□ -0.86
NCBP3-204ENST00000574911 EP400Q96L91 3159 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 ANKRD62A6NC57 917 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 FOXN3O00409 490 aaPredicted RBP9.7□□□□□ -0.86
NCBP3-204ENST00000574911 PPIP5K2O43314 1243 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 TBC1D12O60347 775 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 BCRP11274 1271 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 ITGB5P18084 799 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 NR1D1P20393 614 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 TCEAL1Q15170 157 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 CEP85LQ5SZL2 805 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 DCAF12L1Q5VU92 463 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 PADI6Q6TGC4 694 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 SYCP3Q8IZU3 236 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 AGPAT1Q99943 283 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 FAM107BQ9H098 131 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 TAS2R14Q9NYV8 317 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.7□□□□□ -0.86
NCBP3-204ENST00000574911 AMACRQ9UHK6 382 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 PSME4Q14997 1843 aa9.7□□□□□ -0.86
NCBP3-204ENST00000574911 ANKRD65E5RJM6 399 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 EBAG9O00559 213 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 TTI1O43156 1089 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 DAPK3O43293 454 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 ZEB2O60315 1214 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 ABCB4P21439 1286 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 PTGER2P43116 358 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 HADHBP55084 474 aaKnown RBP9.69□□□□□ -0.86
NCBP3-204ENST00000574911 ITGB3BPQ13352 177 aaPredicted RBP9.69□□□□□ -0.86
NCBP3-204ENST00000574911 ALCAMQ13740 583 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 ARHGAP44Q17R89 818 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 SKIDA1Q1XH10 827 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 SPDYE2Q495Y8 402 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 C12orf56Q8IXR9 622 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 EFCAB13Q8IY85 973 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 VTI1AQ96AJ9 217 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 HOOK2Q96ED9 719 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 GMLQ99445 158 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 THAP2Q9H0W7 228 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 TMEM206Q9H813 350 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 FBXO28Q9NVF7 368 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 K7ENM7 598 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 P4HA2O15460 535 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 DHX15O43143 795 aaKnown RBP9.69□□□□□ -0.86
NCBP3-204ENST00000574911 FGGP02679 453 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 P4HBP07237 508 aaKnown RBP9.69□□□□□ -0.86
NCBP3-204ENST00000574911 KRT13P13646 458 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 LSP1P33241 339 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 FLT3P36888 993 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 CAP2P40123 477 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms