RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 CCNB1P14635 433 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 PRKCIP41743 596 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 PTGIRP43119 386 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 DHX34Q14147 1143 aaKnown RBP15.55■□□□□ 0.08
SMG6-215ENST00000574501 TMEM119Q4V9L6 283 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 USP17L2Q6R6M4 530 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 VSTM1Q6UX27 236 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 TGS1Q96RS0 853 aaKnown RBP15.55■□□□□ 0.08
SMG6-215ENST00000574501 LRRC27Q9C0I9 530 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 MTRF1LQ9UGC7 380 aaKnown RBP15.55■□□□□ 0.08
SMG6-215ENST00000574501 PCDHA2Q9Y5H9 948 aa15.55■□□□□ 0.08
SMG6-215ENST00000574501 O00370 1275 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 AFPP02771 609 aaKnown RBP15.54■□□□□ 0.08
SMG6-215ENST00000574501 GM2AP17900 193 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 CALB2P22676 271 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 PRDX5P30044 214 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 MPP2Q14168 576 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 TTC27Q6P3X3 843 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 FOXR2Q6PJQ5 311 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 BTNL9Q6UXG8 535 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 SEPT14Q6ZU15 432 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 ECHDC2Q86YB7 292 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 RPS6KC1Q96S38 1066 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 PIGSQ96S52 555 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 RNPEPL1Q9HAU8 725 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 KLHL14Q9P2G3 628 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 ARMCX3Q9UH62 379 aaPredicted RBP15.54■□□□□ 0.08
SMG6-215ENST00000574501 EDIL3O43854 480 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 PEX11AO75192 247 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 NPEPPSP55786 919 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 CAVIN4Q5BKX8 364 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 TMEM154Q6P9G4 183 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 LMNTD2Q8IXW0 634 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 ARHGEF26Q96DR7 871 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 RAB3IPQ96QF0 476 aaPredicted RBP15.54■□□□□ 0.08
SMG6-215ENST00000574501 NAP1L3Q99457 506 aaPredicted RBP15.54■□□□□ 0.08
SMG6-215ENST00000574501 RAB34Q9BZG1 259 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 CARD9Q9H257 536 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 BMP2KQ9NSY1 1161 aaPredicted RBP15.54■□□□□ 0.08
SMG6-215ENST00000574501 C2CD2Q9Y426 696 aa15.54■□□□□ 0.08
SMG6-215ENST00000574501 PFASO15067 1338 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 RTN3O95197 1032 aaPredicted RBP15.53■□□□□ 0.08
SMG6-215ENST00000574501 TPBGLP0DKB5 382 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 TARSP26639 723 aaKnown RBP15.53■□□□□ 0.08
SMG6-215ENST00000574501 CASP5P51878 434 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 DRG2P55039 364 aaKnown RBP15.53■□□□□ 0.08
SMG6-215ENST00000574501 ROR2Q01974 943 aaKnown RBP15.53■□□□□ 0.08
SMG6-215ENST00000574501 TNIP1Q15025 636 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 PPP1R15BQ5SWA1 713 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 MFN1Q8IWA4 741 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 SH3RF3Q8TEJ3 882 aaPredicted RBP15.53■□□□□ 0.08
SMG6-215ENST00000574501 PIGOQ8TEQ8 1089 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 CKAP2Q8WWK9 683 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 TMEM109Q9BVC6 243 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 NUP98P52948 1817 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 WFS1O76024 890 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 PPATQ06203 517 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 RNF220Q5VTB9 566 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 FAM47EQ6ZV65 393 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 LONP2Q86WA8 852 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 CCDC65Q8IXS2 484 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 ZDHHC14Q8IZN3 488 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 PRELID2Q8N945 189 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 FAM84BQ96KN1 310 aaPredicted RBP15.53■□□□□ 0.08
SMG6-215ENST00000574501 UBA5Q9GZZ9 404 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 MYLK2Q9H1R3 596 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 SIX2Q9NPC8 291 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 SEPT11Q9NVA2 429 aaKnown RBP15.53■□□□□ 0.08
SMG6-215ENST00000574501 HAO1Q9UJM8 370 aa15.53■□□□□ 0.08
SMG6-215ENST00000574501 XRCC5P13010 732 aaKnown RBP15.52■□□□□ 0.08
SMG6-215ENST00000574501 RARGP13631 454 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 VCAM1P19320 739 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 ATP6V1C1P21283 382 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 KLRK1P26718 216 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 PDIA5Q14554 519 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 PPP2R5EQ16537 467 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 SBK1Q52WX2 424 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 MFSD5Q6N075 450 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 CCDC137Q6PK04 289 aaKnown RBP15.52■□□□□ 0.08
SMG6-215ENST00000574501 CROCCP2Q86T23 111 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 SUPT20HQ8NEM7 779 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 STK32AQ8WU08 396 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 RFFLQ8WZ73 363 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 NUDCD1Q96RS6 583 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 CYP39A1Q9NYL5 469 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 GCNT4Q9P109 453 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 DLGAP2Q9P1A6 1054 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 SEC63Q9UGP8 760 aaKnown RBP15.52■□□□□ 0.08
SMG6-215ENST00000574501 KIAA1024Q9UPX6 916 aa15.52■□□□□ 0.08
SMG6-215ENST00000574501 KAT6BQ8WYB5 2073 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 COL4A1P02462 1669 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 A0A1B0GVG6 124 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 PHF2O75151 1096 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 STX2P32856 288 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 RFC5P40937 340 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 KCNJ1P48048 391 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 MARCKSL1P49006 195 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 PEX5P50542 639 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 JAM2P57087 298 aa15.52■□□□□ 0.07
SMG6-215ENST00000574501 MRPS35P82673 323 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms