RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 KRT13P13646 458 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 SOX10P56693 466 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 ACTR2P61160 394 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 PTK2Q05397 1052 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 BFSP1Q12934 665 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 IQCEQ6IPM2 695 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 TMCO3Q6UWJ1 677 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 LBX2Q6XYB7 198 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 OTUD6AQ7L8S5 288 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 IRF2BP2Q7Z5L9 587 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 CHST13Q8NET6 341 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 KIFC3Q9BVG8 833 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 BTBD7Q9P203 1132 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 DDX41Q9UJV9 622 aaKnown RBP11.41□□□□□ -0.58
USP43-205ENST00000574408 IRF6O14896 467 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 IREB2P48200 963 aaKnown RBP11.41□□□□□ -0.58
USP43-205ENST00000574408 GTF2BQ00403 316 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 MYL7Q01449 175 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 TTLL12Q14166 644 aaPredicted RBP11.41□□□□□ -0.58
USP43-205ENST00000574408 PPP2R5AQ15172 486 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 CCDC60Q8IWA6 550 aaPredicted RBP11.41□□□□□ -0.58
USP43-205ENST00000574408 CLMNQ96JQ2 1002 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 PAGR1Q9BTK6 254 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 SPATA31C2B4DYI2 1134 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 RHOXF2BP0C7M4 288 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 IBSPP21815 317 aaPredicted RBP11.41□□□□□ -0.58
USP43-205ENST00000574408 FSTL1Q12841 308 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 DMP1Q13316 513 aaPredicted RBP11.41□□□□□ -0.58
USP43-205ENST00000574408 MYBPC2Q14324 1141 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 STXBP2Q15833 593 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 C9orf131Q5VYM1 1079 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 MOB2Q70IA6 237 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 ZNF571Q7Z3V5 609 aaPredicted RBP11.41□□□□□ -0.58
USP43-205ENST00000574408 NOA1Q8NC60 698 aaKnown RBP11.41□□□□□ -0.58
USP43-205ENST00000574408 CAGE1Q8TC20 777 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 RHOXF2Q9BQY4 288 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 HSPBP1Q9NZL4 362 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 SEPT9Q9UHD8 586 aaPredicted RBP11.41□□□□□ -0.58
USP43-205ENST00000574408 JRKLQ9Y4A0 524 aa11.41□□□□□ -0.58
USP43-205ENST00000574408 ANKRD65E5RJM6 399 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 DKC1O60832 514 aaKnown RBP eCLIP11.4□□□□□ -0.58
USP43-205ENST00000574408 STAM2O75886 525 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 NPTX2P47972 431 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 SMTNP53814 917 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 IRX3P78415 501 aaPredicted RBP11.4□□□□□ -0.58
USP43-205ENST00000574408 PRKCEQ02156 737 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 SEPT14Q6ZU15 432 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 NCAPG2Q86XI2 1143 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 NOX5Q96PH1 765 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 FBXL5Q9UKA1 691 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 NFASCO94856 1347 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 ZNF185O15231 689 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 SEC31AO94979 1220 aaKnown RBP11.4□□□□□ -0.58
USP43-205ENST00000574408 NCKAP1LP55160 1127 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 KIAA0753Q2KHM9 967 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 XXYLT1Q8NBI6 393 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 ZSWIM2Q8NEG5 633 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 IWS1Q96ST2 819 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 MMS19Q96T76 1030 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 PACSIN1Q9BY11 444 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 INTS2Q9H0H0 1204 aaKnown RBP11.4□□□□□ -0.58
USP43-205ENST00000574408 ST6GALNAC4Q9H4F1 302 aa11.4□□□□□ -0.58
USP43-205ENST00000574408 BZW2Q9Y6E2 419 aaKnown RBP11.4□□□□□ -0.58
USP43-205ENST00000574408 GFPT2O94808 682 aa11.4□□□□□ -0.59
USP43-205ENST00000574408 JAM2P57087 298 aa11.4□□□□□ -0.59
USP43-205ENST00000574408 DLG4P78352 724 aa11.4□□□□□ -0.59
USP43-205ENST00000574408 INTS8Q75QN2 995 aaKnown RBP11.4□□□□□ -0.59
USP43-205ENST00000574408 CYFIP1Q7L576 1253 aa11.4□□□□□ -0.59
USP43-205ENST00000574408 C10orf67Q8IYJ2 551 aa11.4□□□□□ -0.59
USP43-205ENST00000574408 BSNDQ8WZ55 320 aa11.4□□□□□ -0.59
USP43-205ENST00000574408 ANKZF1Q9H8Y5 726 aa11.4□□□□□ -0.59
USP43-205ENST00000574408 KMT5AQ9NQR1 393 aa11.4□□□□□ -0.59
USP43-205ENST00000574408 DNAJC12Q9UKB3 198 aa11.4□□□□□ -0.59
USP43-205ENST00000574408 DOCK5Q9H7D0 1870 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 DENND3A2RUS2 1198 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 GOLGA8IPA6NC78 632 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 GOLGA8JA6NMD2 632 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 STBD1O95210 358 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 YBX3P16989 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
USP43-205ENST00000574408 KLRC1P26715 233 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 SP2Q02086 613 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 MIS18BP1Q6P0N0 1132 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 ABHD15Q6UXT9 468 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 EMSYQ7Z589 1322 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 RIOX2Q8IUF8 465 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 C12orf56Q8IXR9 622 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 SLC17A8Q8NDX2 589 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 TMEM161BQ8NDZ6 487 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 DNERQ8NFT8 737 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 KIFAP3Q92845 792 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 WDR90Q96KV7 1748 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 SYT17Q9BSW7 474 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 SPATC1LQ9H0A9 340 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 FBXO40Q9UH90 709 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 POTEB2H3BUK9 544 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 EIF3JO75822 258 aaKnown RBP11.39□□□□□ -0.59
USP43-205ENST00000574408 PRKCIP41743 596 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 STAT1P42224 750 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 VAMP7P51809 220 aa11.39□□□□□ -0.59
USP43-205ENST00000574408 CKAP4Q07065 602 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms