RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, human

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPV1-208	ENST00000574085	WFS1	O76024	890 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	MYBL1	P10243	752 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	PON1	P27169	355 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	RPL21	P46778	160 aa	Known RBP	13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	PPP2R5E	Q16537	467 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	EXOC3L4	Q17RC7	722 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	TNFAIP8L3	Q5GJ75	292 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	ANKRD42	Q8N9B4	389 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	FAM81A	Q8TBF8	368 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	SCFD1	Q8WVM8	642 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	C18orf8	Q96DM3	657 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	NAP1L3	Q99457	506 aa	Predicted RBP	13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	TMEM109	Q9BVC6	243 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	RMI1	Q9H9A7	625 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	MTRF1L	Q9UGC7	380 aa	Known RBP	13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	RTCB	Q9Y3I0	505 aa	Known RBP	13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	KIAA1551	Q9HCM1	1747 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	TMEM120B	A0PK00	339 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	ERVV-1	B6SEH8	477 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	CETN3	O15182	167 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	GNAT1	P11488	350 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	PAPOLA	P51003	745 aa	Known RBP	13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	ORC2	Q13416	577 aa	Predicted RBP	13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	ANO7	Q6IWH7	933 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	SLC17A8	Q8NDX2	589 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	SLC35G2	Q8TBE7	412 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	TRIM7	Q9C029	511 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	KCTD10	Q9H3F6	313 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	VAT1L	Q9HCJ6	419 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	PICK1	Q9NRD5	415 aa		13.72	□□□□□ -0.21
TRPV1-208	ENST00000574085	XIRP1	Q702N8	1843 aa	Known RBP	13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	SMIM24	O75264	130 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	AFP	P02771	609 aa	Known RBP	13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	TSPY3	P0CV98	308 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	TSPY8	P0CW00	308 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	CREB1	P16220	341 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	FER	P16591	822 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	NR2F2	P24468	414 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	TPP2	P29144	1249 aa	Predicted RBP	13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	GBP1	P32455	592 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	CAVIN4	Q5BKX8	364 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	GJB7	Q6PEY0	223 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	GDAP1	Q8TB36	358 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	FBF1	Q8TES7	1133 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	ANKRD27	Q96NW4	1050 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	SLC4A9	Q96Q91	983 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	TMEM47	Q9BQJ4	181 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	MKNK2	Q9HBH9	465 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	ETNK1	Q9HBU6	452 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	EMILIN3	Q9NT22	766 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	INTU	Q9ULD6	942 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	SHANK3	Q9BYB0	1731 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	ATP8B3	O60423	1300 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	IGSF9B	Q9UPX0	1349 aa		13.71	□□□□□ -0.21
TRPV1-208	ENST00000574085	SPDYE5	A6NIY4	337 aa		13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	CCNB1	P14635	433 aa		13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	ABCB4	P21439	1286 aa		13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	ANXA13	P27216	316 aa		13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	PCK1	P35558	622 aa		13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	DRG2	P55039	364 aa	Known RBP	13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	MXRA7	P84157	204 aa		13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	ROR2	Q01974	943 aa	Known RBP	13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	DIXDC1	Q155Q3	683 aa		13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	LONRF1	Q17RB8	773 aa		13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	AADACL2	Q6P093	401 aa		13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	ARHGAP22	Q7Z5H3	698 aa		13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	FAM163A	Q96GL9	167 aa	Predicted RBP	13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	CARD9	Q9H257	536 aa		13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	DIS3	Q9Y2L1	958 aa	Known RBP	13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	KIF13B	Q9NQT8	1826 aa		13.71	□□□□□ -0.22
TRPV1-208	ENST00000574085	LRRD1	A4D1F6	860 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	GFPT2	O94808	682 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	OAT	P04181	439 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	PDHA1	P08559	390 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	GNAZ	P19086	355 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	PTGIR	P43119	386 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	TUB	P50607	506 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	CCDC25	Q86WR0	208 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	CCDC65	Q8IXS2	484 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	LNX1	Q8TBB1	728 aa	Predicted RBP	13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	UTP4	Q969X6	686 aa	Known RBP	13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	TSPAN18	Q96SJ8	248 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	LZTS2	Q9BRK4	669 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	SPZ1	Q9BXG8	430 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	KCNK9	Q9NPC2	374 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	TMOD4	Q9NZQ9	345 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	SLAIN2	Q9P270	581 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	PRKAG3	Q9UGI9	489 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	SEC63	Q9UGP8	760 aa	Known RBP	13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	PCDHA2	Q9Y5H9	948 aa		13.7	□□□□□ -0.22
TRPV1-208	ENST00000574085	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms