RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 DAGLBQ8NCG7 672 aa24.75■■□□□ 1.55
SNF8-216ENST00000573795 SCLT1Q96NL6 688 aa24.75■■□□□ 1.55
SNF8-216ENST00000573795 AIFM3Q96NN9 605 aa24.75■■□□□ 1.55
SNF8-216ENST00000573795 SPG21Q9NZD8 308 aa24.75■■□□□ 1.55
SNF8-216ENST00000573795 ZDBF2Q9HCK1 2354 aa24.75■■□□□ 1.55
SNF8-216ENST00000573795 REC8O95072 547 aa24.74■■□□□ 1.55
SNF8-216ENST00000573795 EOMESO95936 686 aa24.74■■□□□ 1.55
SNF8-216ENST00000573795 SSRP1Q08945 709 aaKnown RBP24.74■■□□□ 1.55
SNF8-216ENST00000573795 BLIDQ8IZY5 108 aa24.74■■□□□ 1.55
SNF8-216ENST00000573795 LARP6Q9BRS8 491 aaKnown RBP24.74■■□□□ 1.55
SNF8-216ENST00000573795 APOL5Q9BWW9 433 aa24.74■■□□□ 1.55
SNF8-216ENST00000573795 C22orf23Q9BZE7 217 aa24.74■■□□□ 1.55
SNF8-216ENST00000573795 CDH22Q9UJ99 828 aa24.74■■□□□ 1.55
SNF8-216ENST00000573795 A0A087WZ62 844 aa24.73■■□□□ 1.55
SNF8-216ENST00000573795 DEXIO95424 95 aa24.73■■□□□ 1.55
SNF8-216ENST00000573795 MRE11P49959 708 aa24.73■■□□□ 1.55
SNF8-216ENST00000573795 TMC7Q7Z402 723 aa24.73■■□□□ 1.55
SNF8-216ENST00000573795 TRIM22Q8IYM9 498 aa24.73■■□□□ 1.55
SNF8-216ENST00000573795 PRSS33Q8NF86 280 aa24.73■■□□□ 1.55
SNF8-216ENST00000573795 FDXACB1Q9BRP7 624 aaPredicted RBP24.73■■□□□ 1.55
SNF8-216ENST00000573795 C2orf71A6NGG8 1288 aa24.72■■□□□ 1.55
SNF8-216ENST00000573795 SRGAP2BP0DMP2 458 aa24.72■■□□□ 1.55
SNF8-216ENST00000573795 PHKA2P46019 1235 aa24.72■■□□□ 1.55
SNF8-216ENST00000573795 KRT17Q04695 432 aa24.72■■□□□ 1.55
SNF8-216ENST00000573795 MOXD1Q6UVY6 613 aa24.72■■□□□ 1.55
SNF8-216ENST00000573795 ANO5Q75V66 913 aa24.72■■□□□ 1.55
SNF8-216ENST00000573795 TMEM173Q86WV6 379 aaPredicted RBP24.72■■□□□ 1.55
SNF8-216ENST00000573795 ZNF274Q96GC6 653 aaPredicted RBP24.72■■□□□ 1.55
SNF8-216ENST00000573795 TRAIPQ9BWF2 469 aa24.72■■□□□ 1.55
SNF8-216ENST00000573795 GCOM2Q9BZD3 368 aaPredicted RBP24.72■■□□□ 1.55
SNF8-216ENST00000573795 DACT1Q9NYF0 836 aa24.72■■□□□ 1.55
SNF8-216ENST00000573795 HCFC2Q9Y5Z7 792 aa24.72■■□□□ 1.55
SNF8-216ENST00000573795 NT5C1B-RDH14C9J2C7 533 aa24.71■■□□□ 1.55
SNF8-216ENST00000573795 SLC37A4O43826 429 aa24.71■■□□□ 1.55
SNF8-216ENST00000573795 MAFO75444 373 aaPredicted RBP24.71■■□□□ 1.55
SNF8-216ENST00000573795 BCAR1P56945 870 aa24.71■■□□□ 1.55
SNF8-216ENST00000573795 IER5LQ5T953 404 aa24.71■■□□□ 1.55
SNF8-216ENST00000573795 MRPL43Q8N983 215 aaKnown RBP24.71■■□□□ 1.55
SNF8-216ENST00000573795 LPPQ93052 612 aa24.71■■□□□ 1.55
SNF8-216ENST00000573795 PBXIP1Q96AQ6 731 aa24.71■■□□□ 1.55
SNF8-216ENST00000573795 ASIC4Q96FT7 647 aa24.71■■□□□ 1.55
SNF8-216ENST00000573795 CHST12Q9NRB3 414 aa24.71■■□□□ 1.55
SNF8-216ENST00000573795 USP34Q70CQ2 3546 aa24.7■■□□□ 1.55
SNF8-216ENST00000573795 MEIS3P2A8K0S8 358 aa24.7■■□□□ 1.54
SNF8-216ENST00000573795 EML1O00423 815 aa24.7■■□□□ 1.54
SNF8-216ENST00000573795 CLASP2O75122 1294 aaKnown RBP24.7■■□□□ 1.54
SNF8-216ENST00000573795 HOXB8P17481 243 aaPredicted RBP24.7■■□□□ 1.54
SNF8-216ENST00000573795 SMC1AQ14683 1233 aaKnown RBP24.7■■□□□ 1.54
SNF8-216ENST00000573795 PLA2G4FQ68DD2 849 aa24.7■■□□□ 1.54
SNF8-216ENST00000573795 KSR1Q8IVT5 923 aa24.7■■□□□ 1.54
SNF8-216ENST00000573795 MRPL9Q9BYD2 267 aaKnown RBP24.7■■□□□ 1.54
SNF8-216ENST00000573795 SUCLA2Q9P2R7 463 aaPredicted RBP24.7■■□□□ 1.54
SNF8-216ENST00000573795 VAV3Q9UKW4 847 aa24.7■■□□□ 1.54
SNF8-216ENST00000573795 CYP46A1Q9Y6A2 500 aa24.7■■□□□ 1.54
SNF8-216ENST00000573795 EPB41L2O43491 1005 aaKnown RBP24.69■■□□□ 1.54
SNF8-216ENST00000573795 CDC42EP1Q00587 391 aa24.69■■□□□ 1.54
SNF8-216ENST00000573795 SIGLEC14Q08ET2 396 aa24.69■■□□□ 1.54
SNF8-216ENST00000573795 STK3Q13188 491 aa24.69■■□□□ 1.54
SNF8-216ENST00000573795 NONOQ15233 471 aaKnown RBP eCLIP24.69■■□□□ 1.54
SNF8-216ENST00000573795 PTPN21Q16825 1174 aa24.69■■□□□ 1.54
SNF8-216ENST00000573795 INF2Q27J81 1249 aa24.69■■□□□ 1.54
SNF8-216ENST00000573795 ZNF410Q86VK4 478 aa24.69■■□□□ 1.54
SNF8-216ENST00000573795 RHPN2Q8IUC4 686 aa24.69■■□□□ 1.54
SNF8-216ENST00000573795 CASP10Q92851 521 aa24.69■■□□□ 1.54
SNF8-216ENST00000573795 DDX25Q9UHL0 483 aaKnown RBP24.69■■□□□ 1.54
SNF8-216ENST00000573795 KCNJ14Q9UNX9 436 aa24.69■■□□□ 1.54
SNF8-216ENST00000573795 DDX11L8A8MPP1 907 aa24.68■■□□□ 1.54
SNF8-216ENST00000573795 CPLX1O14810 134 aa24.68■■□□□ 1.54
SNF8-216ENST00000573795 SFPQP23246 707 aaKnown RBP eCLIP24.68■■□□□ 1.54
SNF8-216ENST00000573795 SP100P23497 879 aaPredicted RBP24.68■■□□□ 1.54
SNF8-216ENST00000573795 LONRF3Q496Y0 759 aa24.68■■□□□ 1.54
SNF8-216ENST00000573795 GALNT17Q6IS24 598 aa24.68■■□□□ 1.54
SNF8-216ENST00000573795 FAM177A1Q8N128 213 aaPredicted RBP24.68■■□□□ 1.54
SNF8-216ENST00000573795 BCL7CQ8WUZ0 217 aaPredicted RBP24.68■■□□□ 1.54
SNF8-216ENST00000573795 PHOX2BQ99453 314 aa24.68■■□□□ 1.54
SNF8-216ENST00000573795 TM6SF1Q9BZW5 370 aa24.68■■□□□ 1.54
SNF8-216ENST00000573795 ZBP1Q9H171 429 aa24.68■■□□□ 1.54
SNF8-216ENST00000573795 WRAP73Q9P2S5 460 aaPredicted RBP24.68■■□□□ 1.54
SNF8-216ENST00000573795 PIN4Q9Y237 131 aaKnown RBP24.68■■□□□ 1.54
SNF8-216ENST00000573795 B4GALT3O60512 393 aa24.67■■□□□ 1.54
SNF8-216ENST00000573795 DNM2P50570 870 aa24.67■■□□□ 1.54
SNF8-216ENST00000573795 PSMC5P62195 406 aa24.67■■□□□ 1.54
SNF8-216ENST00000573795 PPP2R5CQ13362 524 aa24.67■■□□□ 1.54
SNF8-216ENST00000573795 TWF2Q6IBS0 349 aaKnown RBP24.67■■□□□ 1.54
SNF8-216ENST00000573795 FBXL6Q8N531 539 aa24.67■■□□□ 1.54
SNF8-216ENST00000573795 ZNF579Q8NAF0 562 aaKnown RBP24.67■■□□□ 1.54
SNF8-216ENST00000573795 POMKQ9H5K3 350 aa24.67■■□□□ 1.54
SNF8-216ENST00000573795 NRDE2Q9H7Z3 1164 aa24.67■■□□□ 1.54
SNF8-216ENST00000573795 IFT122Q9HBG6 1241 aa24.67■■□□□ 1.54
SNF8-216ENST00000573795 KCNMB3Q9NPA1 279 aa24.67■■□□□ 1.54
SNF8-216ENST00000573795 FAM105AQ9NUU6 356 aa24.67■■□□□ 1.54
SNF8-216ENST00000573795 TBC1D13Q9NVG8 400 aa24.67■■□□□ 1.54
SNF8-216ENST00000573795 ARID2Q68CP9 1835 aa24.67■■□□□ 1.54
SNF8-216ENST00000573795 ZC3H11AO75152 810 aaKnown RBP eCLIP24.66■■□□□ 1.54
SNF8-216ENST00000573795 ALDH7A1P49419 539 aaKnown RBP24.66■■□□□ 1.54
SNF8-216ENST00000573795 NPEPPSP55786 919 aa24.66■■□□□ 1.54
SNF8-216ENST00000573795 KRT25Q7Z3Z0 450 aa24.66■■□□□ 1.54
SNF8-216ENST00000573795 AUTS2Q8WXX7 1259 aa24.66■■□□□ 1.54
SNF8-216ENST00000573795 TMEM169Q96HH4 297 aa24.66■■□□□ 1.54
SNF8-216ENST00000573795 NLRP4Q96MN2 994 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms