RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 NEK9Q8TD19 979 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 HAS1Q92839 578 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 DYDC2Q96IM9 177 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 TLR9Q9NR96 1032 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 TYW1Q9NV66 732 aaKnown RBP10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 COL4A3BPQ9Y5P4 624 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 IGKV6-21A0A0C4DH24 114 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 GRXCR2A6NFK2 248 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 FGF18O76093 207 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 STBD1O95210 358 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 DNAJB1P25685 340 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 YWHABP31946 246 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 CA8P35219 290 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 IRS1P35568 1242 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 NRIP1P48552 1158 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 GUCY1B3Q02153 619 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 XKR9Q5GH70 373 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 ADGRD2Q7Z7M1 963 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 RBM23Q86U06 439 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 KSR1Q8IVT5 923 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 TPH2Q8IWU9 490 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 HELQQ8TDG4 1101 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 PSPC1Q8WXF1 523 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 TNFRSF25Q93038 417 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 CEP89Q96ST8 783 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 MRPL9Q9BYD2 267 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 ZSWIM4Q9H7M6 989 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 ENTPD7Q9NQZ7 604 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 RGL1Q9NZL6 768 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 LIMCH1Q9UPQ0 1083 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 PCDHGC5Q9Y5F6 944 aa10.79□□□□□ -0.68
NPLOC4-212ENST00000573328 A0A0U1RQF3 1178 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 LINC01565O15544 149 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 TBX10O75333 385 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 PPM1AP35813 382 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 PBX3P40426 434 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 RFC5P40937 340 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 TXKP42681 527 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 FAM189BP81408 668 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 UBE3AQ05086 875 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 CAMK1Q14012 370 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 EMC2Q15006 297 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 LONRF3Q496Y0 759 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 PLPP4Q5VZY2 271 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 FAM178BQ8IXR5 827 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 C4orf19Q8IY42 314 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 GJD3Q8N144 294 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 FAM184AQ8NB25 1140 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 TCP11Q8WWU5 503 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 TMEM143Q96AN5 459 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 C8orf76Q96K31 380 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 ZNF558Q96NG5 402 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 CASD1Q96PB1 797 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 MTRQ99707 1265 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 EIF2AK1Q9BQI3 630 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 C1QTNF1Q9BXJ1 281 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 CWH43Q9H720 699 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 TLE6Q9H808 572 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 TTC12Q9H892 705 aaPredicted RBP10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 CHST12Q9NRB3 414 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 WRAP73Q9P2S5 460 aaPredicted RBP10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 PUF60Q9UHX1 559 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 CD207Q9UJ71 328 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 PCDHA12Q9UN75 941 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 PPME1Q9Y570 386 aa10.78□□□□□ -0.68
NPLOC4-212ENST00000573328 GAS2O43903 313 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 ZC3H11AO75152 810 aaKnown RBP eCLIP10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 ERLIN2O94905 339 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 EOMESO95936 686 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 SRGAP2CP0DJJ0 459 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 SKIP12755 728 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 MCM7P33993 719 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 LTBRP36941 435 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 PHKA2P46019 1235 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 RAB27AP51159 221 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 KRT17Q04695 432 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 DLX2Q07687 328 aaPredicted RBP10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 SPIRE1Q08AE8 756 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 ST3GAL1Q11201 340 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 COL19A1Q14993 1142 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 CTC1Q2NKJ3 1217 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 CLLU1OSQ5K130 101 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 KCNT2Q6UVM3 1135 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 ZNF579Q8NAF0 562 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 MRPS27Q92552 414 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 LPPQ93052 612 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 ZSCAN31Q96LW9 406 aaPredicted RBP10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 DHX33Q9H6R0 707 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 RNF19AQ9NV58 838 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 INPP5FQ9Y2H2 1132 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 MYH11P35749 1972 aa10.77□□□□□ -0.69
NPLOC4-212ENST00000573328 FSD2A1L4K1 749 aa10.76□□□□□ -0.69
NPLOC4-212ENST00000573328 POTEMA6NI47 508 aa10.76□□□□□ -0.69
NPLOC4-212ENST00000573328 WNT7AO00755 349 aa10.76□□□□□ -0.69
NPLOC4-212ENST00000573328 PER2O15055 1255 aa10.76□□□□□ -0.69
NPLOC4-212ENST00000573328 ZBTB39O15060 712 aa10.76□□□□□ -0.69
NPLOC4-212ENST00000573328 MBTPS2O43462 519 aa10.76□□□□□ -0.69
NPLOC4-212ENST00000573328 SRGAP2BP0DMP2 458 aa10.76□□□□□ -0.69
NPLOC4-212ENST00000573328 ATF7P17544 494 aaPredicted RBP10.76□□□□□ -0.69
NPLOC4-212ENST00000573328 COL9A1P20849 921 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms