RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ZNF354CQ86Y25 554 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 IPO4Q8TEX9 1081 aaKnown RBP10.98□□□□□ -0.65
SMG6-213ENST00000573166 U2AF1L4Q8WU68 220 aaKnown RBP10.98□□□□□ -0.65
SMG6-213ENST00000573166 JAKMIP2Q96AA8 810 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.98□□□□□ -0.65
SMG6-213ENST00000573166 SNED1Q8TER0 1413 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 CCDC66A2RUB6 948 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 CA12O43570 354 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 SPOPO43791 374 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 INSRRP14616 1297 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 CD58P19256 250 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 PDE6CP51160 858 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 ZNF569Q5MCW4 686 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 GJC2Q5T442 439 aaPredicted RBP10.98□□□□□ -0.65
SMG6-213ENST00000573166 ENGASEQ8NFI3 743 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 RNF34Q969K3 372 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 PDLIM2Q96JY6 352 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 SNX25Q9H3E2 840 aa10.98□□□□□ -0.65
SMG6-213ENST00000573166 RBAKQ9NYW8 714 aaPredicted RBP10.98□□□□□ -0.65
SMG6-213ENST00000573166 ZNF214Q9UL59 606 aaPredicted RBP10.98□□□□□ -0.65
SMG6-213ENST00000573166 ERICH4A6NGS2 130 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 EML1O00423 815 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 GAS2O43903 313 aaKnown RBP10.97□□□□□ -0.65
SMG6-213ENST00000573166 MYBP10242 640 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 MUTP22033 750 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 CASP14P31944 242 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 SH3D19Q5HYK7 790 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 SIAH1Q8IUQ4 282 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 ATP8B4Q8TF62 1192 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 CCDC51Q96ER9 411 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 KIFC3Q9BVG8 833 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 UBE2TQ9NPD8 197 aaPredicted RBP10.97□□□□□ -0.65
SMG6-213ENST00000573166 SETD4Q9NVD3 440 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 RBPJLQ9UBG7 517 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 RSPH10B2B2RC85 870 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 PDXKO00764 312 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 AOC2O75106 756 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 RSPH10BP0C881 870 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 ABCB4P21439 1286 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 THPOP40225 353 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 PSMC6P62333 389 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 BEX3Q00994 111 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 FSCN1Q16658 493 aaKnown RBP10.97□□□□□ -0.65
SMG6-213ENST00000573166 DSTYKQ6XUX3 929 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 SCARA5Q6ZMJ2 495 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 METTL23Q86XA0 190 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 IFNL1Q8IU54 200 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 PRPF31Q8WWY3 499 aaKnown RBP10.97□□□□□ -0.65
SMG6-213ENST00000573166 SENP7Q9BQF6 1050 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 MYO1AQ9UBC5 1043 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 UBIAD1Q9Y5Z9 338 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 TLR2O60603 784 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 HSD17B4P51659 736 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 BPIFB4P59827 614 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 IFRD2Q12894 506 aaPredicted RBP10.97□□□□□ -0.65
SMG6-213ENST00000573166 ANKRD40Q6AI12 368 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 CCDC50Q8IVM0 306 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 TARS2Q9BW92 718 aaKnown RBP10.97□□□□□ -0.65
SMG6-213ENST00000573166 DUOX1Q9NRD9 1551 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 IGSF9BQ9UPX0 1349 aa10.97□□□□□ -0.65
SMG6-213ENST00000573166 KPNA6O60684 536 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 SLITRK3O94933 977 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 PGK1P00558 417 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 ACTN2P35609 894 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 VAMP7P51809 220 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 KCNH2Q12809 1159 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 BFSP1Q12934 665 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 CRHR2Q13324 411 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 ZNF667Q5HYK9 610 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 KSR1Q8IVT5 923 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 CD99L2Q8TCZ2 262 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 SELENOOQ9BVL4 669 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 PRMT7Q9NVM4 692 aaPredicted RBP10.96□□□□□ -0.65
SMG6-213ENST00000573166 DCDC2CA8MYV0 355 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 ATP9AO75110 1047 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 PRKAR2AP13861 404 aaKnown RBP10.96□□□□□ -0.65
SMG6-213ENST00000573166 ACOT2P49753 483 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 GPC3P51654 580 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 PPP2R5CQ13362 524 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 KIZQ2M2Z5 673 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 CDR2LQ86X02 465 aaPredicted RBP10.96□□□□□ -0.65
SMG6-213ENST00000573166 ADSSL1Q8N142 457 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 GPD1LQ8N335 351 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 FERMT1Q9BQL6 677 aa10.96□□□□□ -0.65
SMG6-213ENST00000573166 IFIH1Q9BYX4 1025 aaKnown RBP10.96□□□□□ -0.65
SMG6-213ENST00000573166 BAZ2AQ9UIF9 1905 aaKnown RBP10.96□□□□□ -0.66
SMG6-213ENST00000573166 ANKRD36CQ5JPF3 1778 aa10.96□□□□□ -0.66
SMG6-213ENST00000573166 ARHGEF37A1IGU5 675 aa10.96□□□□□ -0.66
SMG6-213ENST00000573166 TRIM49P0CI25 452 aa10.96□□□□□ -0.66
SMG6-213ENST00000573166 TRIM49CP0CI26 452 aa10.96□□□□□ -0.66
SMG6-213ENST00000573166 ELNP15502 786 aa10.96□□□□□ -0.66
SMG6-213ENST00000573166 APLP1P51693 650 aa10.96□□□□□ -0.66
SMG6-213ENST00000573166 ARPP19P56211 112 aa10.96□□□□□ -0.66
SMG6-213ENST00000573166 PLCB3Q01970 1234 aa10.96□□□□□ -0.66
SMG6-213ENST00000573166 HAS1Q92839 578 aa10.96□□□□□ -0.66
SMG6-213ENST00000573166 MTG1Q9BT17 334 aaPredicted RBP10.96□□□□□ -0.66
SMG6-213ENST00000573166 SCN7AQ01118 1682 aa10.96□□□□□ -0.66
SMG6-213ENST00000573166 MYH13Q9UKX3 1938 aa10.96□□□□□ -0.66
SMG6-213ENST00000573166 TMEM150BA6NC51 233 aa10.95□□□□□ -0.66
SMG6-213ENST00000573166 ABL1P00519 1130 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms