RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 SCLT1Q96NL6 688 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 C11orf84Q9BUA3 381 aaPredicted RBP13.21□□□□□ -0.29
NDE1-206ENST00000572967 TMEM60Q9H2L4 133 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 TTC12Q9H892 705 aaPredicted RBP13.21□□□□□ -0.29
NDE1-206ENST00000572967 LRFN2Q9ULH4 789 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 RWDD3Q9Y3V2 267 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 C5orf67F2Z3F1 127 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 GRM6O15303 877 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 GPR32O75388 356 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 PSMD10O75832 226 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 STAG3L1P0CL83 205 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 UBA7P41226 1012 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 SARSP49591 514 aaKnown RBP13.2□□□□□ -0.3
NDE1-206ENST00000572967 UBE2HP62256 183 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 PPP2R5CQ13362 524 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 MTERF2Q49AM1 385 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 KRT79Q5XKE5 535 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 ADALQ6DHV7 355 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 EFCAB12Q6NXP0 572 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 CCDC73Q6ZRK6 1079 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 KCTD17Q8N5Z5 321 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 C4orf32Q8N8J7 132 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 CLP1Q92989 425 aaKnown RBP13.2□□□□□ -0.3
NDE1-206ENST00000572967 CDK5RAP3Q96JB5 506 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 ADAM2Q99965 735 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 SH2D3AQ9BRG2 576 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 NSUN3Q9H649 340 aaKnown RBP13.2□□□□□ -0.3
NDE1-206ENST00000572967 HCSTQ9UBK5 93 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 LRWD1Q9UFC0 647 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 FBXO2Q9UK22 296 aaPredicted RBP13.2□□□□□ -0.3
NDE1-206ENST00000572967 ST3GAL5Q9UNP4 418 aa13.2□□□□□ -0.3
NDE1-206ENST00000572967 SPTBN5Q9NRC6 3674 aaKnown RBP13.2□□□□□ -0.3
NDE1-206ENST00000572967 CUL9Q8IWT3 2517 aa13.19□□□□□ -0.3
NDE1-206ENST00000572967 BRWD1Q9NSI6 2320 aa13.19□□□□□ -0.3
NDE1-206ENST00000572967 H3BQ06 376 aaPredicted RBP13.19□□□□□ -0.3
NDE1-206ENST00000572967 WNT7AO00755 349 aa13.19□□□□□ -0.3
NDE1-206ENST00000572967 MBD3O95983 291 aa13.19□□□□□ -0.3
NDE1-206ENST00000572967 BMPR1AP36894 532 aa13.19□□□□□ -0.3
NDE1-206ENST00000572967 NLRP11P59045 1033 aaKnown RBP13.19□□□□□ -0.3
NDE1-206ENST00000572967 TBC1D8BQ0IIM8 1120 aa13.19□□□□□ -0.3
NDE1-206ENST00000572967 PLA2G4FQ68DD2 849 aa13.19□□□□□ -0.3
NDE1-206ENST00000572967 NCAPH2Q6IBW4 605 aa13.19□□□□□ -0.3
NDE1-206ENST00000572967 LINC01465Q8N7H1 131 aa13.19□□□□□ -0.3
NDE1-206ENST00000572967 MRPS27Q92552 414 aaKnown RBP13.19□□□□□ -0.3
NDE1-206ENST00000572967 HAS1Q92839 578 aa13.19□□□□□ -0.3
NDE1-206ENST00000572967 CALML4Q96GE6 196 aa13.19□□□□□ -0.3
NDE1-206ENST00000572967 ALG13Q9NP73 1137 aaKnown RBP13.19□□□□□ -0.3
NDE1-206ENST00000572967 CCDC39Q9UFE4 941 aa13.19□□□□□ -0.3
NDE1-206ENST00000572967 PCDHA7Q9UN72 937 aa13.19□□□□□ -0.3
NDE1-206ENST00000572967 TBKBP1A7MCY6 615 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 GPR182O15218 404 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 MAGEB2O15479 319 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 FGFR1P11362 822 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 IL9P15248 144 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 MUTP22033 750 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 FGFR4P22455 802 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 CMA1P23946 247 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 TMOD1P28289 359 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 MCM4P33991 863 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 TECP42680 631 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 CRYBB1P53674 252 aaPredicted RBP13.18□□□□□ -0.3
NDE1-206ENST00000572967 DRP2Q13474 957 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 ODR4Q5SWX8 454 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 CRIPAKQ8N1N5 446 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 IGSF22Q8N9C0 903 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 NT5C3AQ9H0P0 336 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 GDPD2Q9HCC8 539 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 C1orf112Q9NSG2 853 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 CLDND1Q9NY35 253 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 VAV3Q9UKW4 847 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 PCDHB7Q9Y5E2 793 aa13.18□□□□□ -0.3
NDE1-206ENST00000572967 C9IYK1 514 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 PRPF40AO75400 957 aaKnown RBP13.17□□□□□ -0.3
NDE1-206ENST00000572967 ITGB1P05556 798 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 RB1P06400 928 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 GPC3P51654 580 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 EPHA7Q15375 998 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 SPOUT1Q5T280 376 aaKnown RBP13.17□□□□□ -0.3
NDE1-206ENST00000572967 B3GNT9Q6UX72 402 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 SNX29Q8TEQ0 813 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 NLRP7Q8WX94 980 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 LMAN2LQ9H0V9 348 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 CSRNP2Q9H175 543 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 ADAMTS10Q9H324 1103 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 RGS18Q9NS28 235 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 NRBP2Q9NSY0 501 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 BMP2KQ9NSY1 1161 aaPredicted RBP13.17□□□□□ -0.3
NDE1-206ENST00000572967 USP25Q9UHP3 1055 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 PCDHGC5Q9Y5F6 944 aa13.17□□□□□ -0.3
NDE1-206ENST00000572967 MYH15Q9Y2K3 1946 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.16□□□□□ -0.3
NDE1-206ENST00000572967 EML1O00423 815 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 CSDE1O75534 798 aaKnown RBP13.16□□□□□ -0.3
NDE1-206ENST00000572967 DNAJB1P25685 340 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 GTF2F1P35269 517 aaKnown RBP eCLIP13.16□□□□□ -0.3
NDE1-206ENST00000572967 HYAL1Q12794 435 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 CLUL1Q15846 466 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 LEXMQ3ZCV2 418 aa13.16□□□□□ -0.3
NDE1-206ENST00000572967 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
NDE1-206ENST00000572967 FAM102BQ5T8I3 360 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms