RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 MGAT3Q09327 533 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 NFX1Q12986 1120 aaKnown RBP8.68□□□□□ -1.02
SMG6-211ENST00000572369 LPIN1Q14693 890 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 FBXO47Q5MNV8 452 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 FAM117BQ6P1L5 589 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 TSHZ1Q6ZSZ6 1077 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 ANO5Q75V66 913 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 BMP8AQ7Z5Y6 402 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 MYOCDQ8IZQ8 938 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 PHOSPHO2Q8TCD6 241 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 ZNF668Q96K58 619 aaPredicted RBP8.68□□□□□ -1.02
SMG6-211ENST00000572369 TUFT1Q9NNX1 390 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.68□□□□□ -1.02
SMG6-211ENST00000572369 WRAP73Q9P2S5 460 aaPredicted RBP8.68□□□□□ -1.02
SMG6-211ENST00000572369 PPME1Q9Y570 386 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 STK24Q9Y6E0 443 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 MYH15Q9Y2K3 1946 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 DENND3A2RUS2 1198 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 VWA3AA6NCI4 1184 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 ZBTB39O15060 712 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 GPR182O15218 404 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 STX6O43752 255 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 MAFO75444 373 aaPredicted RBP8.67□□□□□ -1.02
SMG6-211ENST00000572369 MED24O75448 989 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 BMP15O95972 392 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 PRPHP41219 470 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 FXR2P51116 673 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMG6-211ENST00000572369 CRYBB1P53674 252 aaPredicted RBP8.67□□□□□ -1.02
SMG6-211ENST00000572369 DEFB103AP81534 67 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 CDC42EP1Q00587 391 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 BECN1Q14457 450 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 PDIA5Q14554 519 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 TARBP2Q15633 366 aaKnown RBP8.67□□□□□ -1.02
SMG6-211ENST00000572369 ZRSR1Q15695 479 aaKnown RBP8.67□□□□□ -1.02
SMG6-211ENST00000572369 LEXMQ3ZCV2 418 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 KRT79Q5XKE5 535 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 CATSPER3Q86XQ3 398 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 RHPN2Q8IUC4 686 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 HERC6Q8IVU3 1022 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 SUGP1Q8IWZ8 645 aaKnown RBP8.67□□□□□ -1.02
SMG6-211ENST00000572369 ZNF710Q8N1W2 664 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 SNX29Q8TEQ0 813 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 PIGOQ8TEQ8 1089 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 TCP11Q8WWU5 503 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 VWCEQ96DN2 955 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 CDK5RAP3Q96JB5 506 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 NACC1Q96RE7 527 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 OSMRQ99650 979 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 MTRQ99707 1265 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 HSD17B14Q9BPX1 270 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 GCOM2Q9BZD3 368 aaPredicted RBP8.67□□□□□ -1.02
SMG6-211ENST00000572369 OSBPL7Q9BZF2 842 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 UBE2ZQ9H832 354 aaPredicted RBP8.67□□□□□ -1.02
SMG6-211ENST00000572369 ANKEF1Q9NU02 776 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 SUCLA2Q9P2R7 463 aaPredicted RBP8.67□□□□□ -1.02
SMG6-211ENST00000572369 PADI3Q9ULW8 664 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 KDM3AQ9Y4C1 1321 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 PCDHA11Q9Y5I1 949 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 SQORQ9Y6N5 450 aa8.67□□□□□ -1.02
SMG6-211ENST00000572369 GCN1Q92616 2671 aaKnown RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 A0A087WWV3 80 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 ARHGEF35A5YM69 484 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 RBAK-RBAKDNI3L0D1 243 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 GAS2O43903 313 aaKnown RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 USO1O60763 962 aaKnown RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 STBD1O95210 358 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 LYPLA2O95372 231 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 PDIA4P13667 645 aaKnown RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 RPA1P27694 616 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 GPC3P51654 580 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 ATP2C1P98194 919 aaPredicted RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 CEBPZQ03701 1054 aaKnown RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 EMC2Q15006 297 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 SF3A1Q15459 793 aaKnown RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 TCTN1Q2MV58 587 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 FOXD4L5Q5VV16 416 aaPredicted RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 POTEGQ6S5H5 508 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMG6-211ENST00000572369 MAEAQ7L5Y9 396 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 TMCO2Q7Z6W1 182 aaPredicted RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 ADSSL1Q8N142 457 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 C4orf32Q8N8J7 132 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 ZNF579Q8NAF0 562 aaKnown RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 RASSF8Q8NHQ8 419 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 PSPC1Q8WXF1 523 aaKnown RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 FOXD4L4Q8WXT5 416 aaPredicted RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 TMEM143Q96AN5 459 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 PBXIP1Q96AQ6 731 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 NLRP4Q96MN2 994 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 YME1L1Q96TA2 773 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 POLR3CQ9BUI4 534 aaPredicted RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 FTHL17Q9BXU8 183 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 INO80BQ9C086 356 aaPredicted RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 ZSCAN16Q9H4T2 348 aaPredicted RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 AGO3Q9H9G7 860 aaKnown RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 CDHR5Q9HBB8 845 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 ATP6V0A4Q9HBG4 840 aa8.66□□□□□ -1.02
SMG6-211ENST00000572369 DDX19AQ9NUU7 478 aaKnown RBP8.66□□□□□ -1.02
SMG6-211ENST00000572369 LRFN2Q9ULH4 789 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms