RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 KLRC2P26717 231 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 SMARCA1P28370 1054 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 LMNB2Q03252 620 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 ZNF528Q3MIS6 628 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 PDXDC2PQ6P474 469 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 DCLRE1AQ6PJP8 1040 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 CATIPQ7Z7H3 387 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 NXPE3Q969Y0 559 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 BORCS6Q96GS4 357 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 CHAMP1Q96JM3 812 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 MYL10Q9BUA6 226 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 IL25Q9H293 177 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 ZNF302Q9NR11 478 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 DIAPH3Q9NSV4 1193 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 SEC63Q9UGP8 760 aaKnown RBP11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 ATRXP46100 2492 aa11.88□□□□□ -0.51
CTDNEP1-202ENST00000570380 CCDC195A0A1B0GUA6 201 aa11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 SSBP05455 408 aaKnown RBP eCLIP11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 FGFR4P22455 802 aa11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 CLCN3P51790 818 aa11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 STARD6P59095 220 aa11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 TRDNQ13061 729 aa11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 SWSAP1Q6NVH7 229 aa11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 TRMT1LQ7Z2T5 733 aaKnown RBP11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 SRBD1Q8N5C6 995 aaKnown RBP11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 LINC01465Q8N7H1 131 aa11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 ZNF668Q96K58 619 aaPredicted RBP11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 EMILIN2Q9BXX0 1053 aa11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 MAN1C1Q9NR34 630 aa11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 SLC2A4RGQ9NR83 387 aa11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 TBC1D13Q9NVG8 400 aa11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 DNAJB4Q9UDY4 337 aa11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 FBXO4Q9UKT5 387 aa11.87□□□□□ -0.51
CTDNEP1-202ENST00000570380 CLUHO75153 1309 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 B4GALT3O60512 393 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 PLEKHA8P1O95397 391 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 SLC11A1P49279 550 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 COL9A2Q14055 689 aaPredicted RBP11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 LONRF3Q496Y0 759 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 CEP55Q53EZ4 464 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 EFCAB12Q6NXP0 572 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 ZNF654Q8IZM8 581 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 CMTR1Q8N1G2 835 aaKnown RBP11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 LRRC71Q8N4P6 559 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 ZBTB44Q8NCP5 570 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 ST13P5Q8NFI4 369 aaPredicted RBP11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 IGDCC4Q8TDY8 1250 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 BBXQ8WY36 941 aaPredicted RBP11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 STAMQ92783 540 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 LPPQ93052 612 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 PGBD1Q96JS3 809 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 MAP3K14Q99558 947 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 RHOBTB2Q9BYZ6 727 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 LNPKQ9C0E8 428 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 SPATA6Q9NWH7 488 aaPredicted RBP11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 SMG5Q9UPR3 1016 aaKnown RBP11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 AKT3Q9Y243 479 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 TAF6LQ9Y6J9 622 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 FAM208BQ5VWN6 2430 aa11.86□□□□□ -0.51
CTDNEP1-202ENST00000570380 hCG_1642624A0A1W2PR95 340 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 CARNS1A5YM72 827 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 MEIS3P2A8K0S8 358 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 ANHXE9PGG2 379 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 MEIS1O00470 390 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 INPPL1O15357 1258 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 DHX15O43143 795 aaKnown RBP11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 LAMTOR5O43504 91 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 LILRB5O75023 590 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 RFPL2O75678 378 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 CYP21A2P08686 494 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 MYBP10242 640 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 LAMP2P13473 410 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 DARSP14868 501 aaKnown RBP11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 KIF5BP33176 963 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 PHKA2P46019 1235 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 CSTF1Q05048 431 aaKnown RBP11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 HTR4Q13639 388 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 MIS18BP1Q6P0N0 1132 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 CYP26C1Q6V0L0 522 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 CKAP2LQ8IYA6 745 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 CTCFLQ8NI51 663 aaPredicted RBP11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 ATRIPQ8WXE1 791 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 SECISBP2LQ93073 1101 aaKnown RBP11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 LZTS2Q9BRK4 669 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 RPP25Q9BUL9 199 aaKnown RBP11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 EPC1Q9H2F5 836 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 PARD6AQ9NPB6 346 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 DACT1Q9NYF0 836 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 USP18Q9UMW8 372 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 MTF2Q9Y483 593 aaPredicted RBP11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 PCDHGA2Q9Y5H1 932 aa11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 MAFBQ9Y5Q3 323 aaPredicted RBP11.85□□□□□ -0.51
CTDNEP1-202ENST00000570380 KANSL1LA0AUZ9 987 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 HIP1O00291 1037 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 MAGEB2O15479 319 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 CSDE1O75534 798 aaKnown RBP11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 OFD1O75665 1012 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 GPC3P51654 580 aa11.84□□□□□ -0.51
CTDNEP1-202ENST00000570380 ANTXR2P58335 489 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms