RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 PARM1Q6UWI2 310 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 METTL7BQ6UX53 244 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 MTSS1LQ765P7 747 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 VSIG10LQ86VR7 867 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 MCF2L2Q86YR7 1114 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 ZNF843Q8N446 348 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 SMG7Q92540 1137 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 STRBPQ96SI9 672 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 PDCD2LQ9BRP1 358 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 EDEM2Q9BV94 578 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 EMILIN2Q9BXX0 1053 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.71□□□□□ -1.182e-6■□□□□ 10.1
HERPUD1-217ENST00000569429 PUS7LQ9H0K6 701 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 MAN1C1Q9NR34 630 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 DPP7Q9UHL4 492 aa7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 NOB1Q9ULX3 412 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-217ENST00000569429 NT5C1B-RDH14C9J2C7 533 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 K7ESF4 209 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 CNPP09543 421 aaKnown RBP7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 HOXA6P31267 233 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 BCAR1P56945 870 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 FGD1P98174 961 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 NEDD9Q14511 834 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 UTP14CQ5TAP6 766 aaKnown RBP7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 ELMSAN1Q6PJG2 1045 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 GET4Q7L5D6 327 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 ABI1Q8IZP0 508 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 NME8Q8N427 588 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 ST13P5Q8NFI4 369 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 GPKOWQ92917 476 aaPredicted RBP eCLIP7.7□□□□□ -1.181e-6■■■■□ 20.5
HERPUD1-217ENST00000569429 ZNF707Q96C28 371 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 DNAJC2Q99543 621 aaKnown RBP7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 FAM49AQ9H0Q0 323 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 SMOC1Q9H4F8 434 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 GPCPD1Q9NPB8 672 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 IL17RBQ9NRM6 502 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 MTMR7Q9Y216 660 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 ABCB11O95342 1321 aa7.7□□□□□ -1.18
HERPUD1-217ENST00000569429 TSC2P49815 1807 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 BAZ2BQ9UIF8 2168 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 RELNP78509 3460 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 H0Y626 953 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 MAN2B1O00754 1011 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 RPS6KA5O75582 802 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 TRIM16O95361 564 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 CHGBP05060 677 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 MYCLP12524 364 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 MPLP40238 635 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 KRT76Q01546 638 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 GHRHRQ02643 423 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 C1QBPQ07021 282 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 TMEM62Q0P6H9 643 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 CYFIP1Q7L576 1253 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 CACNA2D4Q7Z3S7 1137 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 AACSQ86V21 672 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 WDR5BQ86VZ2 330 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 TMEM173Q86WV6 379 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 SPEM1Q8N4L4 309 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 HDAC7Q8WUI4 952 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 PHKBQ93100 1093 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 IGSF21Q96ID5 467 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 CCDC86Q9H6F5 360 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 LMAN1LQ9HAT1 526 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 PAG1Q9NWQ8 432 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 STK39Q9UEW8 545 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 ST3GAL5Q9UNP4 418 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 SPTBN1Q01082 2364 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 LRRK2Q5S007 2527 aa7.69□□□□□ -1.18
HERPUD1-217ENST00000569429 MYH9P35579 1960 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 CAPN8A6NHC0 703 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 RRN3P2A6NIE6 340 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 GPR182O15218 404 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 RFPL2O75678 378 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 KCNC4Q03721 635 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 GAS6Q14393 721 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 DSC3Q14574 896 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 PGM5Q15124 567 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 TCEAL6Q6IPX3 200 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 STOX1Q6ZVD7 989 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 TCEAL3Q969E4 200 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 MRPL9Q9BYD2 267 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 NT5C3AQ9H0P0 336 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 ADAMTS10Q9H324 1103 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 PIDD1Q9HB75 910 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 EPB41L4AQ9HCS5 686 aaPredicted RBP7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 HEBP1Q9NRV9 189 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 ERAP1Q9NZ08 941 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 CDH7Q9ULB5 785 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 NOC2LQ9Y3T9 749 aaKnown RBP7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 PCDHA2Q9Y5H9 948 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 COL4A2P08572 1712 aa7.68□□□□□ -1.18
HERPUD1-217ENST00000569429 CACNA1DQ01668 2161 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 LNP1A1A4G5 178 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 TSPY2A6NKD2 308 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 NMT2O60551 498 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 C1RP00736 705 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 SLC3A2P08195 630 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 PDHBP11177 359 aa7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 RDXP35241 583 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-217ENST00000569429 TDO2P48775 406 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms