RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 A0A087WZ62 844 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 LRRIQ4A6NIV6 560 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 H0YCG3 227 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 GPR182O15218 404 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 NBNO60934 754 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 EFCAB14O75071 495 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 FAM13AO94988 1023 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 SCP2P22307 547 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 NAMPTP43490 491 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 SMTNP53814 917 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 UBE2HP62256 183 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 FAM160A1Q05DH4 1040 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 NCBP1Q09161 790 aaKnown RBP10.08□□□□□ -0.8
CHD9-219ENST00000569225 RAD51AP2Q09MP3 1159 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 CAPSQ13938 189 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 MBTPS1Q14703 1052 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 ARSHQ5FYA8 562 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 KANK3Q6NY19 840 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 SRGAP1Q7Z6B7 1085 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 KSR1Q8IVT5 923 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 DEPTORQ8TB45 409 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 REEP2Q9BRK0 252 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 FDXACB1Q9BRP7 624 aaPredicted RBP10.08□□□□□ -0.8
CHD9-219ENST00000569225 NFKBIZQ9BYH8 718 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 IFIH1Q9BYX4 1025 aaKnown RBP10.08□□□□□ -0.8
CHD9-219ENST00000569225 UBE2OQ9C0C9 1292 aaKnown RBP10.08□□□□□ -0.8
CHD9-219ENST00000569225 PARVGQ9HBI0 331 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 KBTBD4Q9NVX7 518 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 PRPF40AO75400 957 aaKnown RBP10.08□□□□□ -0.8
CHD9-219ENST00000569225 FGBP02675 491 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 MYL1P05976 194 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 PLS3P13797 630 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 GAP43P17677 238 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 ABCD1P33897 745 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 EFNA5P52803 228 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 PTENP60484 403 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 PLEKHG4Q58EX7 1191 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 CNKSR3Q6P9H4 555 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 SLC17A8Q8NDX2 589 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 CNNM3Q8NE01 707 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 SPIRE2Q8WWL2 714 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 DDX12PQ92771 950 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 FTHL17Q9BXU8 183 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 GOLPH3LQ9H4A5 285 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 ZHX3Q9H4I2 956 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 SERTAD1Q9UHV2 236 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 HOOK1Q9UJC3 728 aaKnown RBP10.08□□□□□ -0.8
CHD9-219ENST00000569225 DNAH12Q6ZR08 3092 aa10.08□□□□□ -0.8
CHD9-219ENST00000569225 CEP290O15078 2479 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 NPHP3-ACAD11A0A0J9YXS1 232 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 MYMKA6NI61 221 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 CCDC169A6NNP5 214 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 ACTN4O43707 911 aaKnown RBP10.07□□□□□ -0.8
CHD9-219ENST00000569225 KINO60870 393 aaKnown RBP10.07□□□□□ -0.8
CHD9-219ENST00000569225 BAIAP3O94812 1187 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 ZNF202O95125 648 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 CD52P31358 61 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 PEX3P56589 373 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 GIT2Q14161 759 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 IKBKEQ14164 716 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 LONRF3Q496Y0 759 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 PRPF38BQ5VTL8 546 aaKnown RBP10.07□□□□□ -0.8
CHD9-219ENST00000569225 DYMQ7RTS9 669 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 CATSPER4Q7RTX7 472 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 IFNLR1Q8IU57 520 aaPredicted RBP10.07□□□□□ -0.8
CHD9-219ENST00000569225 CCDC65Q8IXS2 484 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 DAW1Q8N136 415 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 MYCT1Q8N699 235 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 ZNF668Q96K58 619 aaPredicted RBP10.07□□□□□ -0.8
CHD9-219ENST00000569225 GDF15Q99988 308 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 CDHR5Q9HBB8 845 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 IFT122Q9HBG6 1241 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 KMT5AQ9NQR1 393 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 SEL1LQ9UBV2 794 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 PADI3Q9ULW8 664 aa10.07□□□□□ -0.8
CHD9-219ENST00000569225 NOC2LQ9Y3T9 749 aaKnown RBP10.07□□□□□ -0.8
CHD9-219ENST00000569225 MKI67P46013 3256 aaKnown RBP10.07□□□□□ -0.8
CHD9-219ENST00000569225 ABHD14A-ACY1A0A1B0GW23 586 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 INO80B-WBP1J3KQ70 363 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 ERLIN2O94905 339 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 ACRP10323 421 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 IDEP14735 1019 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 BMP8BP34820 402 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 NPTX2P47972 431 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 ZNF131P52739 623 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 ASIC1P78348 528 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 CACNB1Q02641 598 aaPredicted RBP10.06□□□□□ -0.8
CHD9-219ENST00000569225 NFX1Q12986 1120 aaKnown RBP10.06□□□□□ -0.8
CHD9-219ENST00000569225 MAPK7Q13164 816 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 GPNMBQ14956 572 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 CDCA2Q69YH5 1023 aaPredicted RBP10.06□□□□□ -0.8
CHD9-219ENST00000569225 CNNM4Q6P4Q7 775 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 KRBA2Q6ZNG9 492 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 ZNF365Q70YC5 407 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 FMR1NBQ8N0W7 255 aaPredicted RBP10.06□□□□□ -0.8
CHD9-219ENST00000569225 DBF4BQ8NFT6 615 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 TMEM40Q8WWA1 233 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 BSNDQ8WZ55 320 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 PAGE5Q96GU1 130 aa10.06□□□□□ -0.8
CHD9-219ENST00000569225 C7orf25Q9BPX7 421 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms