RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	MGEA5	O60502	916 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	LPXN	O60711	386 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	STBD1	O95210	358 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	LYPLA2	O95372	231 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	PHKA2	P46019	1235 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	RAB27A	P51159	221 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	SPIRE1	Q08AE8	756 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	SPRED2	Q7Z698	418 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	MICAL1	Q8TDZ2	1067 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	PRPF31	Q8WWY3	499 aa	Known RBP	11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	TMEM143	Q96AN5	459 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	PGBD4	Q96DM1	585 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	MTMR9	Q96QG7	549 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	MRPL9	Q9BYD2	267 aa	Known RBP	11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	TMEM117	Q9H0C3	514 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	NSUN3	Q9H649	340 aa	Known RBP	11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	DHX33	Q9H6R0	707 aa	Known RBP	11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	PRDM6	Q9NQX0	595 aa		11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	PUF60	Q9UHX1	559 aa	Known RBP	11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	PIN4	Q9Y237	131 aa	Known RBP	11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	MRPL42	Q9Y6G3	142 aa	Known RBP	11.55	□□□□□ -0.56
UBR1-207	ENST00000568782	KIAA1671	Q9BY89	1806 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782		A0A0U1RQF3	1178 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	POTEM	A6NI47	508 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	CSDE1	O75534	798 aa	Known RBP	11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	LAG3	P18627	525 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	MUT	P22033	750 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	U2AF2	P26368	475 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	GJB2	P29033	226 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	FAM189B	P81408	668 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	KRT17	Q04695	432 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	LAMTOR4	Q0VGL1	99 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	DRP2	Q13474	957 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	RILPL1	Q5EBL4	403 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	FAM102B	Q5T8I3	360 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	LARP1B	Q659C4	914 aa	Known RBP	11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	ECHDC2	Q86YB7	292 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	THNSL1	Q8IYQ7	743 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	LRRC43	Q8N309	656 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	RNF149	Q8NC42	400 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	MCPH1	Q8NEM0	835 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	HSD17B14	Q9BPX1	270 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	LRWD1	Q9UFC0	647 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	FAM50B	Q9Y247	325 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	TRANK1	O15050	2925 aa		11.54	□□□□□ -0.56
UBR1-207	ENST00000568782	ARHGEF35	A5YM69	484 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	PDC	P20941	246 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	FGFR4	P22455	802 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	RPA1	P27694	616 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	PPM1A	P35813	382 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	CCT6A	P40227	531 aa	Known RBP	11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	ALDH7A1	P49419	539 aa	Known RBP	11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	UBE3A	Q05086	875 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	PDIA5	Q14554	519 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	DSC3	Q14574	896 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	PUS10	Q3MIT2	529 aa	Known RBP	11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	KRT79	Q5XKE5	535 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	GLB1L	Q6UWU2	654 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	DTHD1	Q6ZMT9	781 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	FERMT3	Q86UX7	667 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	KSR1	Q8IVT5	923 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	HACE1	Q8IYU2	909 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	CRIPAK	Q8N1N5	446 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	TMEM87A	Q8NBN3	555 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	PIGO	Q8TEQ8	1089 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	CEP89	Q96ST8	783 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	TMEM60	Q9H2L4	133 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	RC3H2	Q9HBD1	1191 aa	Known RBP	11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	ALG13	Q9NP73	1137 aa	Known RBP	11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	PLAGL2	Q9UPG8	496 aa		11.53	□□□□□ -0.56
UBR1-207	ENST00000568782	UNC80	Q8N2C7	3258 aa		11.52	□□□□□ -0.56
UBR1-207	ENST00000568782	FSD2	A1L4K1	749 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	INO80B-WBP1	J3KQ70	363 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	ZBTB39	O15060	712 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	USO1	O60763	962 aa	Known RBP	11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	FGFR1	P11362	822 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	AXL	P30530	894 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	RARRES1	P49788	294 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	FXR2	P51116	673 aa	Known RBP eCLIP	11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	RNASEL	Q05823	741 aa	Known RBP	11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	POU5F1B	Q06416	359 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	PTGDR	Q13258	359 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	TMEM132A	Q24JP5	1023 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	PDE12	Q6L8Q7	609 aa	Known RBP	11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	CATSPER3	Q86XQ3	398 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	ZBTB8OS	Q8IWT0	167 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	KLHL23	Q8NBE8	558 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	CNNM3	Q8NE01	707 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	URGCP	Q8TCY9	931 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	ZNF558	Q96NG5	402 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	FAM193B	Q96PV7	902 aa	Predicted RBP	11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	TRAIP	Q9BWF2	469 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	TRIM6	Q9C030	488 aa	Predicted RBP	11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	UBE2Z	Q9H832	354 aa	Predicted RBP	11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	UBN1	Q9NPG3	1134 aa		11.52	□□□□□ -0.57

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