RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 CXCL10P02778 98 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 DARSP14868 501 aaKnown RBP11.2□□□□□ -0.62
PKM-221ENST00000568743 LIG1P18858 919 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 RFC2P35250 354 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 AFMP43652 599 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 NFX1Q12986 1120 aaKnown RBP11.2□□□□□ -0.62
PKM-221ENST00000568743 MXD4Q14582 209 aaPredicted RBP11.2□□□□□ -0.62
PKM-221ENST00000568743 LONRF3Q496Y0 759 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 CLEC17AQ6ZS10 378 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 TSHZ1Q6ZSZ6 1077 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 ZNF365Q70YC5 407 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 FAM228AQ86W67 206 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 CEP57L1Q8IYX8 460 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 DBF4BQ8NFT6 615 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 DDX12PQ92771 950 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 KIFAP3Q92845 792 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 DRC1Q96MC2 740 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 GDF15Q99988 308 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.2□□□□□ -0.622e-24■□□□□ 9.3
PKM-221ENST00000568743 GCOM2Q9BZD3 368 aaPredicted RBP11.2□□□□□ -0.62
PKM-221ENST00000568743 UBE2OQ9C0C9 1292 aaKnown RBP11.2□□□□□ -0.62
PKM-221ENST00000568743 CUEDC2Q9H467 287 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 ZHX3Q9H4I2 956 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 MINDY3Q9H8M7 445 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 IFT122Q9HBG6 1241 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 KCND2Q9NZV8 630 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 TANC1Q9C0D5 1861 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 CEP290O15078 2479 aa11.2□□□□□ -0.62
PKM-221ENST00000568743 PDE4DIPQ5VU43 2346 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 CCDC169A6NNP5 214 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 ASAP2O43150 1006 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 TBCAO75347 108 aaKnown RBP11.19□□□□□ -0.62
PKM-221ENST00000568743 RPS6KA5O75582 802 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 FAM13AO94988 1023 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 ZNF202O95125 648 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 PARNO95453 639 aaKnown RBP11.19□□□□□ -0.62
PKM-221ENST00000568743 SLFN14P0C7P3 912 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 IDEP14735 1019 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 EIF4BP23588 611 aaKnown RBP11.19□□□□□ -0.62
PKM-221ENST00000568743 PHKA2P46019 1235 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 NPTX2P47972 431 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 PEX3P56589 373 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 PTENP60484 403 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 PAK2Q13177 524 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 TFDP1Q14186 410 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 PLEKHG4Q58EX7 1191 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 TMEM240Q5SV17 173 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 C9orf50Q5SZB4 431 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 CHRDL2Q6WN34 429 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 OTOP2Q7RTS6 562 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 ZNF410Q86VK4 478 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 RPUSD2Q8IZ73 545 aaKnown RBP11.19□□□□□ -0.62
PKM-221ENST00000568743 FMR1NBQ8N0W7 255 aaPredicted RBP11.19□□□□□ -0.62
PKM-221ENST00000568743 DNAJC19Q96DA6 116 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 PAGE5Q96GU1 130 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 IFT74Q96LB3 600 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 GBP4Q96PP9 640 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 TIPINQ9BVW5 301 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 IFIH1Q9BYX4 1025 aaKnown RBP11.19□□□□□ -0.62
PKM-221ENST00000568743 BLZF1Q9H2G9 400 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 TNMDQ9H2S6 317 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 ERVK-5Q9HDB9 667 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 KBTBD4Q9NVX7 518 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 PADI3Q9ULW8 664 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 ST3GAL5Q9UNP4 418 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 SCN5AQ14524 2016 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 SIP14410 1827 aa11.19□□□□□ -0.62
PKM-221ENST00000568743 ADGRA3Q8IWK6 1321 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 INO80B-WBP1J3KQ70 363 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 SLC16A4O15374 487 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 NR1I2O75469 434 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 FGBP02675 491 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 PRR29P0C7W0 189 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 PLS3P13797 630 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 IBSPP21815 317 aaPredicted RBP11.18□□□□□ -0.62
PKM-221ENST00000568743 UBE2HP62256 183 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 ASIC1P78348 528 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 CDC42EP1Q00587 391 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 FAM160A1Q05DH4 1040 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 DMP1Q13316 513 aaPredicted RBP11.18□□□□□ -0.62
PKM-221ENST00000568743 SNW1Q13573 536 aaKnown RBP11.18□□□□□ -0.62
PKM-221ENST00000568743 CUL4BQ13620 913 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 SHHQ15465 462 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 ODR4Q5SWX8 454 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 CNKSR3Q6P9H4 555 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 KRBA2Q6ZNG9 492 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 CATSPER4Q7RTX7 472 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 SFR1Q86XK3 245 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 ZNF710Q8N1W2 664 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 MYCT1Q8N699 235 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 ENGASEQ8NFI3 743 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 DEPTORQ8TB45 409 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 SEPT8Q92599 483 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 PYM1Q9BRP8 204 aaKnown RBP11.18□□□□□ -0.62
PKM-221ENST00000568743 TRIM9Q9C026 710 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 INO80BQ9C086 356 aaPredicted RBP11.18□□□□□ -0.62
PKM-221ENST00000568743 TMX1Q9H3N1 280 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 MAGEF1Q9HAY2 307 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 PARVGQ9HBI0 331 aa11.18□□□□□ -0.62
PKM-221ENST00000568743 KMT5AQ9NQR1 393 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms