RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 EMC2Q15006 297 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 RABEP1Q15276 862 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 LEXMQ3ZCV2 418 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 KSR1Q8IVT5 923 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 ABI1Q8IZP0 508 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 RNF169Q8NCN4 708 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 SPPL3Q8TCT6 385 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 TCP11Q8WWU5 503 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 PSPC1Q8WXF1 523 aaKnown RBP16.13■□□□□ 0.17
CMTM3-215ENST00000568477 PABPC5Q96DU9 382 aaKnown RBP16.13■□□□□ 0.17
CMTM3-215ENST00000568477 MTMR9Q96QG7 549 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 FOXP1Q9H334 677 aaPredicted RBP16.13■□□□□ 0.17
CMTM3-215ENST00000568477 CHST12Q9NRB3 414 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 TYW1Q9NV66 732 aaKnown RBP16.13■□□□□ 0.17
CMTM3-215ENST00000568477 COL4A3BPQ9Y5P4 624 aa16.13■□□□□ 0.17
CMTM3-215ENST00000568477 FNDC1Q4ZHG4 1894 aaPredicted RBP16.12■□□□□ 0.17
CMTM3-215ENST00000568477 A0A0U1RQF3 1178 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 SLITRK3O94933 977 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 LYPLA2O95372 231 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 LAG3P18627 525 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 MCM7P33993 719 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 GNL2Q13823 731 aaKnown RBP16.12■□□□□ 0.17
CMTM3-215ENST00000568477 COL19A1Q14993 1142 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 CSPP1Q1MSJ5 1256 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 EP400NLQ6ZTU2 488 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 CATSPER4Q7RTX7 472 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 LRRC43Q8N309 656 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 FBXO18Q8NFZ0 1043 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 PRPF31Q8WWY3 499 aaKnown RBP16.12■□□□□ 0.17
CMTM3-215ENST00000568477 PPP2R3CQ969Q6 453 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 TMEM143Q96AN5 459 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 CCDC43Q96MW1 224 aaKnown RBP16.12■□□□□ 0.17
CMTM3-215ENST00000568477 HSD17B14Q9BPX1 270 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 TMEM60Q9H2L4 133 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 UPF2Q9HAU5 1272 aaKnown RBP16.12■□□□□ 0.17
CMTM3-215ENST00000568477 BMP2KQ9NSY1 1161 aaPredicted RBP16.12■□□□□ 0.17
CMTM3-215ENST00000568477 RNF19AQ9NV58 838 aa16.12■□□□□ 0.17
CMTM3-215ENST00000568477 PIN4Q9Y237 131 aaKnown RBP16.12■□□□□ 0.17
CMTM3-215ENST00000568477 XIRP2A4UGR9 3374 aa16.11■□□□□ 0.17
CMTM3-215ENST00000568477 ST18O60284 1047 aa16.11■□□□□ 0.17
CMTM3-215ENST00000568477 EOMESO95936 686 aa16.11■□□□□ 0.17
CMTM3-215ENST00000568477 DNAJB1P25685 340 aa16.11■□□□□ 0.17
CMTM3-215ENST00000568477 UBE3AQ05086 875 aa16.11■□□□□ 0.17
CMTM3-215ENST00000568477 ORC2Q13416 577 aaPredicted RBP16.11■□□□□ 0.17
CMTM3-215ENST00000568477 CAMK1Q14012 370 aa16.11■□□□□ 0.17
CMTM3-215ENST00000568477 TWF2Q6IBS0 349 aaKnown RBP16.11■□□□□ 0.17
CMTM3-215ENST00000568477 THNSL1Q8IYQ7 743 aa16.11■□□□□ 0.17
CMTM3-215ENST00000568477 COLGALT1Q8NBJ5 622 aa16.11■□□□□ 0.17
CMTM3-215ENST00000568477 POF1BQ8WVV4 589 aa16.11■□□□□ 0.17
CMTM3-215ENST00000568477 CLDND1Q9NY35 253 aa16.11■□□□□ 0.17
CMTM3-215ENST00000568477 HCSTQ9UBK5 93 aa16.11■□□□□ 0.17
CMTM3-215ENST00000568477 POTEMA6NI47 508 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 H3BQ06 376 aaPredicted RBP16.1■□□□□ 0.17
CMTM3-215ENST00000568477 ZBTB39O15060 712 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 ASAP2O43150 1006 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 SRGAP2CP0DJJ0 459 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 LAMTOR4Q0VGL1 99 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 HYAL1Q12794 435 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 CLLU1OSQ5K130 101 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 SRGAP1Q7Z6B7 1085 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 ZNF598Q86UK7 904 aaKnown RBP16.1■□□□□ 0.17
CMTM3-215ENST00000568477 NOSTRINQ8IVI9 506 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 CASD1Q96PB1 797 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 MTRQ99707 1265 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 TRAIPQ9BWF2 469 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 CWH43Q9H720 699 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 IFT122Q9HBG6 1241 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 ANKEF1Q9NU02 776 aa16.1■□□□□ 0.17
CMTM3-215ENST00000568477 ATG2AQ2TAZ0 1938 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 FGF18O76093 207 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 OR52Z1P0C646 297 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 SKIP12755 728 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 ATF7P17544 494 aaPredicted RBP16.09■□□□□ 0.17
CMTM3-215ENST00000568477 IRS1P35568 1242 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 ANP32AP39687 249 aaKnown RBP16.09■□□□□ 0.17
CMTM3-215ENST00000568477 PHKA2P46019 1235 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 RAB27AP51159 221 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 ZNF174Q15697 407 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 PUS10Q3MIT2 529 aaKnown RBP16.09■□□□□ 0.17
CMTM3-215ENST00000568477 TTC38Q5R3I4 469 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 PTCRAQ6ISU1 281 aaPredicted RBP16.09■□□□□ 0.17
CMTM3-215ENST00000568477 FERMT3Q86UX7 667 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.09■□□□□ 0.17
CMTM3-215ENST00000568477 HELQQ8TDG4 1101 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 ZNF558Q96NG5 402 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 MRPL9Q9BYD2 267 aaKnown RBP16.09■□□□□ 0.17
CMTM3-215ENST00000568477 XPNPEP1Q9NQW7 623 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 AGPAT5Q9NUQ2 364 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 NOL7Q9UMY1 257 aaKnown RBP16.09■□□□□ 0.17
CMTM3-215ENST00000568477 KIF3AQ9Y496 699 aa16.09■□□□□ 0.17
CMTM3-215ENST00000568477 ARID2Q68CP9 1835 aa16.08■□□□□ 0.17
CMTM3-215ENST00000568477 DGAT1O75907 488 aa16.08■□□□□ 0.16
CMTM3-215ENST00000568477 PPM1AP35813 382 aa16.08■□□□□ 0.16
CMTM3-215ENST00000568477 TRAPPC10P48553 1259 aa16.08■□□□□ 0.16
CMTM3-215ENST00000568477 MXD4Q14582 209 aaPredicted RBP16.08■□□□□ 0.16
CMTM3-215ENST00000568477 CTC1Q2NKJ3 1217 aa16.08■□□□□ 0.16
CMTM3-215ENST00000568477 LRRC55Q6ZSA7 311 aa16.08■□□□□ 0.16
CMTM3-215ENST00000568477 RNF149Q8NC42 400 aa16.08■□□□□ 0.16
CMTM3-215ENST00000568477 RSPH1Q8WYR4 309 aa16.08■□□□□ 0.16
CMTM3-215ENST00000568477 IGFLR1Q9H665 355 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms