RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 SYDE2Q5VT97 1194 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 RPUSD2Q8IZ73 545 aaKnown RBP9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 ARFGAP2Q8N6H7 521 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 LMBR1Q8WVP7 490 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 ATG4AQ8WYN0 398 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 PBKQ96KB5 322 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 TACO1Q9BSH4 297 aaKnown RBP9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 STK38LQ9Y2H1 464 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 EMSYQ7Z589 1322 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 CCDC169A6NNP5 214 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 F8VZ95 297 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 RBAK-RBAKDNI3L0D1 243 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 TGFB1I1O43294 461 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 IL1R1P14778 569 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 NF2P35240 595 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 SOX5P35711 763 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 FMO5P49326 533 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 SKOR1P84550 965 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 GABPAQ06546 454 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 LONRF1Q17RB8 773 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 DCAF12L1Q5VU92 463 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 APOBEC3HQ6NTF7 200 aaKnown RBP9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 RUFY4Q6ZNE9 571 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 TMC3Q7Z5M5 1100 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 TBC1D1Q86TI0 1168 aaPredicted RBP9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 SPIRE2Q8WWL2 714 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 SEC16BQ96JE7 1060 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 CSRNP1Q96S65 589 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 PSMD1Q99460 953 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 PRMT1Q99873 361 aaKnown RBP9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 CBWD1Q9BRT8 395 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 HEMGNQ9BXL5 484 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 MTFR1LQ9H019 292 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 SEMA4AQ9H3S1 761 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 PARVGQ9HBI0 331 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 KLHL11Q9NVR0 708 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 ASIC3Q9UHC3 531 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 COG5Q9UP83 839 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 USTQ9Y2C2 406 aa9.7□□□□□ -0.86
HDGFL3-206ENST00000568294 ARAP2Q8WZ64 1704 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 ARP10275 920 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 BMP3P12645 472 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 CDC25CP30307 473 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 HSPA9P38646 679 aaKnown RBP9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 CLK2P49760 499 aaKnown RBP9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 HIBCHQ6NVY1 386 aaPredicted RBP9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 CCDC50Q8IVM0 306 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 ARHGEF19Q8IW93 802 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 SYT2Q8N9I0 419 aaPredicted RBP9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 LRRC57Q8N9N7 239 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 SLC40A1Q9NP59 571 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 KCNMB3Q9NPA1 279 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 SIX2Q9NPC8 291 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 WRAP73Q9P2S5 460 aaPredicted RBP9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 RNF14Q9UBS8 474 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 ANKRD63C9JTQ0 380 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 FAM107AO95990 144 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 HARSP12081 509 aaKnown RBP9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 RPA1P27694 616 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 FRMD5Q7Z6J6 570 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 CDAN1Q8IWY9 1227 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 ETNPPLQ8TBG4 499 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 DHX38Q92620 1227 aaKnown RBP9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 ZNF577Q9BSK1 485 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 WDR18Q9BV38 432 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 TOPORSQ9NS56 1045 aaPredicted RBP9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 CTNNAL1Q9UBT7 734 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 ALG6Q9Y672 507 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 GSTTP1A0A1W2PQM5 241 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 CYP26A1O43174 497 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 MYCLP12524 364 aaPredicted RBP9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 FERP16591 822 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 CUL1Q13616 776 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 EDRF1Q3B7T1 1238 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 GKAP1Q5VSY0 366 aaPredicted RBP9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 JAMLQ86YT9 394 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 KIF2BQ8N4N8 673 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 GIMAP7Q8NHV1 300 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 PI4K2AQ9BTU6 479 aa9.69□□□□□ -0.86
HDGFL3-206ENST00000568294 A0A1W2PRG0 241 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 DNM1LO00429 736 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 HIP1RO75146 1068 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 CREB1P16220 341 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 COMTP21964 271 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 MAP2K2P36507 400 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 PMS2P54278 862 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 ITIH3Q06033 890 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 RBM26Q5T8P6 1007 aaKnown RBP9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 PHLDB3Q6NSJ2 640 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 PASD1Q8IV76 773 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 SYCE1Q8N0S2 351 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 SCFD2Q8WU76 684 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 LXNQ9BS40 222 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 DDX23Q9BUQ8 820 aaKnown RBP9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 EDEM3Q9BZQ6 932 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 KLC4Q9NSK0 619 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 hCG_1984214I3L0E3 225 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 PDXKO00764 312 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 PIAS1O75925 651 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 SGPL1O95470 568 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms