RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 RFC2P35250 354 aa19.93■□□□□ 0.78
COMMD4-222ENST00000568034 MAGEA10P43363 369 aaPredicted RBP19.93■□□□□ 0.78
COMMD4-222ENST00000568034 ZNF131P52739 623 aa19.93■□□□□ 0.78
COMMD4-222ENST00000568034 EPHB4P54760 987 aa19.93■□□□□ 0.78
COMMD4-222ENST00000568034 MDM2Q00987 491 aaPredicted RBP19.93■□□□□ 0.78
COMMD4-222ENST00000568034 FAM160A1Q05DH4 1040 aa19.93■□□□□ 0.78
COMMD4-222ENST00000568034 MXD4Q14582 209 aaPredicted RBP19.93■□□□□ 0.78
COMMD4-222ENST00000568034 TCTN1Q2MV58 587 aa19.93■□□□□ 0.78
COMMD4-222ENST00000568034 IFNLR1Q8IU57 520 aaPredicted RBP19.93■□□□□ 0.78
COMMD4-222ENST00000568034 GRAMD1CQ8IYS0 662 aa19.93■□□□□ 0.78
COMMD4-222ENST00000568034 ZNF710Q8N1W2 664 aa19.93■□□□□ 0.78
COMMD4-222ENST00000568034 TMEM199Q8N511 208 aa19.93■□□□□ 0.78
COMMD4-222ENST00000568034 RNF149Q8NC42 400 aa19.93■□□□□ 0.78
COMMD4-222ENST00000568034 TRIM9Q9C026 710 aa19.93■□□□□ 0.78
COMMD4-222ENST00000568034 AGO3Q9H9G7 860 aaKnown RBP19.93■□□□□ 0.78
COMMD4-222ENST00000568034 ODF2LQ9ULJ1 636 aa19.93■□□□□ 0.78
COMMD4-222ENST00000568034 ADGRA3Q8IWK6 1321 aa19.93■□□□□ 0.78
COMMD4-222ENST00000568034 SFI1A8K8P3 1242 aa19.92■□□□□ 0.78
COMMD4-222ENST00000568034 PARNO95453 639 aaKnown RBP19.92■□□□□ 0.78
COMMD4-222ENST00000568034 DARSP14868 501 aaKnown RBP19.92■□□□□ 0.78
COMMD4-222ENST00000568034 CASP1P29466 404 aa19.92■□□□□ 0.78
COMMD4-222ENST00000568034 CDC42EP1Q00587 391 aa19.92■□□□□ 0.78
COMMD4-222ENST00000568034 CDCA2Q69YH5 1023 aaPredicted RBP19.92■□□□□ 0.78
COMMD4-222ENST00000568034 CNNM4Q6P4Q7 775 aa19.92■□□□□ 0.78
COMMD4-222ENST00000568034 KRBA2Q6ZNG9 492 aa19.92■□□□□ 0.78
COMMD4-222ENST00000568034 C16orf59Q7L2K0 433 aa19.92■□□□□ 0.78
COMMD4-222ENST00000568034 DYMQ7RTS9 669 aa19.92■□□□□ 0.78
COMMD4-222ENST00000568034 CEP57L1Q8IYX8 460 aa19.92■□□□□ 0.78
COMMD4-222ENST00000568034 NLRP7Q8WX94 980 aa19.92■□□□□ 0.78
COMMD4-222ENST00000568034 PAGE5Q96GU1 130 aa19.92■□□□□ 0.78
COMMD4-222ENST00000568034 DRC1Q96MC2 740 aa19.92■□□□□ 0.78
COMMD4-222ENST00000568034 MINDY3Q9H8M7 445 aa19.92■□□□□ 0.78
COMMD4-222ENST00000568034 NOC2LQ9Y3T9 749 aaKnown RBP19.92■□□□□ 0.78
COMMD4-222ENST00000568034 SQORQ9Y6N5 450 aa19.92■□□□□ 0.78
COMMD4-222ENST00000568034 FRMD3A2A2Y4 597 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 NR1I2O75469 434 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 SRGAP2CP0DJJ0 459 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 NAMPTP43490 491 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 PTENP60484 403 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 FPGSQ05932 587 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 POU5F1BQ06416 359 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 PLEKHG4Q58EX7 1191 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 TSHZ1Q6ZSZ6 1077 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 DEFB128Q7Z7B8 93 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 FAM228AQ86W67 206 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 FIZ1Q96SL8 496 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 C7orf25Q9BPX7 421 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 KIFC3Q9BVG8 833 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 NFKBIZQ9BYH8 718 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 IL23AQ9NPF7 189 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 MYH11P35749 1972 aa19.91■□□□□ 0.78
COMMD4-222ENST00000568034 CSDE1O75534 798 aaKnown RBP19.9■□□□□ 0.78
COMMD4-222ENST00000568034 PRR29P0C7W0 189 aa19.9■□□□□ 0.78
COMMD4-222ENST00000568034 PLS3P13797 630 aa19.9■□□□□ 0.78
COMMD4-222ENST00000568034 EIF4BP23588 611 aaKnown RBP19.9■□□□□ 0.78
COMMD4-222ENST00000568034 AFMP43652 599 aa19.9■□□□□ 0.78
COMMD4-222ENST00000568034 NPTX2P47972 431 aa19.9■□□□□ 0.78
COMMD4-222ENST00000568034 PPIGQ13427 754 aaKnown RBP eCLIP19.9■□□□□ 0.782e-6■■■■■ 31.1
COMMD4-222ENST00000568034 TFDP1Q14186 410 aa19.9■□□□□ 0.78
COMMD4-222ENST00000568034 CNNM3Q8NE01 707 aa19.9■□□□□ 0.78
COMMD4-222ENST00000568034 GDF15Q99988 308 aa19.9■□□□□ 0.78
COMMD4-222ENST00000568034 GCOM2Q9BZD3 368 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-222ENST00000568034 BLZF1Q9H2G9 400 aa19.9■□□□□ 0.78
COMMD4-222ENST00000568034 C17orf75Q9HAS0 396 aa19.9■□□□□ 0.78
COMMD4-222ENST00000568034 ERVK-5Q9HDB9 667 aa19.9■□□□□ 0.78
COMMD4-222ENST00000568034 LRRIQ4A6NIV6 560 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 FAM13AO94988 1023 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 KRT18P05783 430 aaKnown RBP19.89■□□□□ 0.77
COMMD4-222ENST00000568034 ACRP10323 421 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 FGFR4P22455 802 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 CD52P31358 61 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 PEX3P56589 373 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 MBTD1Q05BQ5 628 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 CUL4BQ13620 913 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 PPP2R5AQ15172 486 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 USP38Q8NB14 1042 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 SPIRE2Q8WWL2 714 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 SCLT1Q96NL6 688 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 LBHD1Q9BQE6 289 aaPredicted RBP19.89■□□□□ 0.77
COMMD4-222ENST00000568034 PARVGQ9HBI0 331 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 ARHGAP28Q9P2N2 729 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 PADI3Q9ULW8 664 aa19.89■□□□□ 0.77
COMMD4-222ENST00000568034 TBCAO75347 108 aaKnown RBP19.88■□□□□ 0.77
COMMD4-222ENST00000568034 RPS6KA5O75582 802 aa19.88■□□□□ 0.77
COMMD4-222ENST00000568034 PFKMP08237 780 aa19.88■□□□□ 0.77
COMMD4-222ENST00000568034 PHKA2P46019 1235 aa19.88■□□□□ 0.77
COMMD4-222ENST00000568034 AMPD3Q01432 767 aa19.88■□□□□ 0.77
COMMD4-222ENST00000568034 DMP1Q13316 513 aaPredicted RBP19.88■□□□□ 0.77
COMMD4-222ENST00000568034 AMHR2Q16671 573 aa19.88■□□□□ 0.77
COMMD4-222ENST00000568034 SRGAP1Q7Z6B7 1085 aa19.88■□□□□ 0.77
COMMD4-222ENST00000568034 DBF4BQ8NFT6 615 aa19.88■□□□□ 0.77
COMMD4-222ENST00000568034 KCNN1Q92952 543 aa19.88■□□□□ 0.77
COMMD4-222ENST00000568034 IFT74Q96LB3 600 aa19.88■□□□□ 0.77
COMMD4-222ENST00000568034 TIGD1Q96MW7 591 aa19.88■□□□□ 0.77
COMMD4-222ENST00000568034 NTPCRQ9BSD7 190 aaKnown RBP19.88■□□□□ 0.77
COMMD4-222ENST00000568034 IFIH1Q9BYX4 1025 aaKnown RBP19.88■□□□□ 0.77
COMMD4-222ENST00000568034 LRRC27Q9C0I9 530 aa19.88■□□□□ 0.77
COMMD4-222ENST00000568034 CCDC113Q9H0I3 377 aa19.88■□□□□ 0.77
COMMD4-222ENST00000568034 TMX1Q9H3N1 280 aa19.88■□□□□ 0.77
COMMD4-222ENST00000568034 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms