RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 CHURC1Q8WUH1 139 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 RICTORQ6R327 1708 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 LRRIQ4A6NIV6 560 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 TMEM191BP0C7N4 346 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 HMGB2P26583 209 aaKnown RBP13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 NOP14P78316 857 aaKnown RBP13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 ICA1Q05084 483 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 MKRN4PQ13434 485 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 TTC25Q96NG3 672 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 MXD3Q9BW11 206 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 TMEM206Q9H813 350 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 ASAP1Q9ULH1 1129 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 MAGED2Q9UNF1 606 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 UBTFL6P0CB48 400 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 ANTXR2P58335 489 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 KDSRQ06136 332 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 CTTNQ14247 550 aaKnown RBP13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 ZBED8Q8IZ13 594 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 SNF8Q96H20 258 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 NUP85Q9BW27 656 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 GCLMP48507 274 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 RCAN1P53805 252 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 COPS2P61201 443 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 STX1BP61266 288 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 KRT17Q04695 432 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 CERKLQ49MI3 558 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 KCTD6Q8NC69 237 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 TRABDQ9H4I3 376 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 ZBTB1Q9Y2K1 713 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 TMEM94Q12767 1356 aa13.25□□□□□ -0.29
CSPG4P13-202ENST00000567704 GOLGA8QA0A0J9YX86 632 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 GOLGA8OA6NCC3 632 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 GSG1L2A8MUP6 293 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 GOLGA8NF8WBI6 632 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 TJP3O95049 919 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 KRT10P13645 584 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 MED21Q13503 144 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 SLC29A2Q14542 456 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 TRAPPC3LQ5T215 181 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 IZUMO3Q5VZ72 239 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 PIGOQ8TEQ8 1089 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 ZNF577Q9BSK1 485 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 NPHS2Q9NP85 383 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 CAPN6Q9Y6Q1 641 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 hCG_1984214I3L0E3 225 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 P4HA1P13674 534 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 PDIA2Q13087 525 aaKnown RBP13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 ALX1Q15699 326 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 ZNF713Q8N859 430 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 PRPF31Q8WWY3 499 aaKnown RBP13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 C9orf72Q96LT7 481 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 SLAIN2Q9P270 581 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 MRPL11Q9Y3B7 192 aaKnown RBP13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 ZNF804BA4D1E1 1349 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 PITPNM2Q9BZ72 1349 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 ALAS1P13196 640 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 NQO1P15559 274 aaKnown RBP13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 SCNN1DP51172 638 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 PAPD7Q5XG87 772 aaKnown RBP13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 IGDCC4Q8TDY8 1250 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 CALR3Q96L12 384 aaKnown RBP13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 SENP2Q9HC62 589 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 CPDO75976 1380 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 POTEB3A0JP26 581 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 POTECB2RU33 542 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 GOLGA8RI6L899 631 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 LPXNO60711 386 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 TNNC2P02585 160 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 MCF2P10911 925 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 CD44P16070 742 aaKnown RBP13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 GALCP54803 685 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 GPS1Q13098 491 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 KNOP1Q1ED39 458 aaKnown RBP13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 DEPDC1BQ8WUY9 529 aa13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 TRPC5Q9UL62 973 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P13-202ENST00000567704 SYNJ2BP-COX16A0A087WUM0 186 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 WDR64B1ANS9 1081 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 CDH16O75309 829 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 RHOBTB3O94955 611 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 HSPA4LO95757 839 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 TTLL1O95922 423 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 MDH1BQ5I0G3 518 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 OLFML2BQ68BL8 750 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 C4orf33Q8N1A6 199 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 PPM1NQ8N819 430 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 ANKS1AQ92625 1134 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 ZWILCHQ9H900 591 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 UBN1Q9NPG3 1134 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 TMEM260Q9NX78 707 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 ADAM22Q9P0K1 906 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 COX16Q9P0S2 106 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 A6NJR5 290 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 MAP2K7O14733 419 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 CCDC22O60826 627 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 MARK3P27448 753 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 STAT4Q14765 748 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 KLHL38Q2WGJ6 581 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms